RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 AIM2O14862 343 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 SEMA7AO75326 666 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 BCAS1O75363 584 aaPredicted RBP18.38■□□□□ 0.53
PTCD3-206ENST00000465560 THBS1P07996 1170 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF17P17021 662 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 SLC6A2P23975 617 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 PLAURQ03405 335 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 RBBP4Q09028 425 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 TMEM44Q2T9K0 475 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 LIN52Q52LA3 116 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 RABL3Q5HYI8 236 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 ENPP6Q6UWR7 440 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 PTOV1Q86YD1 416 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 EID3Q8N140 333 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 FAM26EQ8N5C1 309 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 C11orf65Q8NCR3 313 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 OR5W2Q8NH69 310 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 OR10A6Q8NH74 314 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 ZBTB8AQ96BR9 441 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 SPATA9Q9BWV2 254 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 PRDM14Q9GZV8 571 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 EFCAB1Q9HAE3 211 aa18.38■□□□□ 0.53
PTCD3-206ENST00000465560 EXOSC3Q9NQT5 275 aaKnown RBP18.38■□□□□ 0.53
PTCD3-206ENST00000465560 OR2M5A3KFT3 312 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 LINC01387J3KSC0 135 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CCL21O00585 134 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 DNAJA2O60884 412 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 WDR1O75083 606 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CYP7B1O75881 506 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 NUDT14O95848 222 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 LINGO3P0C6S8 592 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 ETS2P15036 469 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 GZMMP51124 257 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CCR4P51679 360 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CBFBQ13951 182 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 MRPL2Q5T653 305 aaKnown RBP18.37■□□□□ 0.53
PTCD3-206ENST00000465560 FAM91A1Q658Y4 838 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 HACD2Q6Y1H2 254 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 VRK2Q86Y07 508 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 PM20D2Q8IYS1 436 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 GTPBP8Q8N3Z3 284 aaPredicted RBP18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CCDC197Q8NCU1 140 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 HIPK4Q8NE63 616 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 GPR119Q8TDV5 335 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 CACYBPQ9HB71 228 aaKnown RBP18.37■□□□□ 0.53
PTCD3-206ENST00000465560 ANGPT4Q9Y264 503 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF443Q9Y2A4 671 aaPredicted RBP18.37■□□□□ 0.53
PTCD3-206ENST00000465560 MEMO1Q9Y316 297 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 IFT52Q9Y366 437 aa18.37■□□□□ 0.53
PTCD3-206ENST00000465560 E9PLN8 166 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 AGFG2O95081 481 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 PABPC4LP0CB38 370 aaKnown RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 GABRA1P14867 456 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 LHX2P50458 406 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 NUDT2P50583 147 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 EEF1A1P68104 462 aaKnown RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 LARS2Q15031 903 aaKnown RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 RNF220Q5VTB9 566 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF585AQ6P3V2 769 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 C3P1Q6ZMU1 363 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF836Q6ZNA1 936 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 CALHM3Q86XJ0 350 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 ZZZ3Q8IYH5 903 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 OR5M1Q8NGP8 315 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 WDYHV1Q96HA8 205 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 VKORC1Q9BQB6 163 aa18.36■□□□□ 0.53
PTCD3-206ENST00000465560 GPATCH1Q9BRR8 931 aaKnown RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 DNAJB12Q9NXW2 375 aaKnown RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 GPC6Q9Y625 555 aaPredicted RBP18.36■□□□□ 0.53
PTCD3-206ENST00000465560 CDHR4A6H8M9 788 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 SHISA8B8ZZ34 492 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ESRRAP11474 423 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 CPN1P15169 458 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF708P17019 499 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ACVR2AP27037 513 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 PCGF2P35227 344 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 EIF1P41567 113 aaKnown RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 PER3P56645 1201 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 PCBP3P57721 371 aaKnown RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ART3Q13508 389 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 TOMM34Q15785 309 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ZSWIM7Q19AV6 140 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 C8orf82Q6P1X6 216 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 KRT73Q86Y46 540 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 SLC30A8Q8IWU4 369 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ULK2Q8IYT8 1036 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 POC1BQ8TC44 478 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 CNOT9Q92600 299 aaKnown RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 RNF145Q96MT1 663 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 DMRTA2Q96SC8 542 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 NPAS1Q99742 590 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 HOPXQ9BPY8 73 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF232Q9UNY5 417 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 CAMK2AQ9UQM7 478 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF337Q9Y3M9 751 aa18.35■□□□□ 0.53
PTCD3-206ENST00000465560 LRRK2Q5S007 2527 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 KIAA1549Q9HCM3 1950 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 AHRRA9YTQ3 701 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms