RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 EVA1AQ9H8M9 152 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 ACAD8Q9UKU7 415 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 OSGIN2Q9Y236 505 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 GPC6Q9Y625 555 aaPredicted RBP15.37■□□□□ 0.05
USP39-211ENST00000465282 FLNCQ14315 2725 aa15.37■□□□□ 0.05
USP39-211ENST00000465282 HIVEP3Q5T1R4 2406 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 CDHR4A6H8M9 788 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 PRORSD1PA6NEY8 169 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 C17orf51A8MQB3 221 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 NUDT14O95848 222 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 PABPC4LP0CB38 370 aaKnown RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 UBTFL6P0CB48 400 aaPredicted RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 PGCP20142 388 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 PRKAR1BP31321 381 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 PTGER4P35408 488 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 CA7P43166 264 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 UQCRFS1P47985 274 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 PCBP3P57721 371 aaKnown RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 CRYZQ08257 329 aaKnown RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 VMACQ2NL98 169 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 TMEM44Q2T9K0 475 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 EIF2S3LQ2VIR3 472 aaKnown RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 PLPPR5Q32ZL2 321 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 ZNF311Q5JNZ3 666 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 RPS26P11Q5JNZ5 115 aaPredicted RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 PATL1Q86TB9 770 aaKnown RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 SLC15A3Q8IY34 581 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 ZZZ3Q8IYH5 903 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 GTPBP8Q8N3Z3 284 aaPredicted RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 TMCO5AQ8N6Q1 288 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 GPR119Q8TDV5 335 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 TMEM234Q8WY98 164 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 RELTQ969Z4 430 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 SFXN2Q96NB2 322 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 ZNF583Q96ND8 569 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 MED17Q9NVC6 651 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 SPRR3Q9UBC9 169 aa15.36■□□□□ 0.05
USP39-211ENST00000465282 ZNF443Q9Y2A4 671 aaPredicted RBP15.36■□□□□ 0.05
USP39-211ENST00000465282 PHF3Q92576 2039 aaKnown RBP15.35■□□□□ 0.05
USP39-211ENST00000465282 FIGNL2A6NMB9 653 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 NPIPA2E9PIF3 369 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 NPIPA3F8WFD2 350 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 FAAHO00519 579 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 WDR1O75083 606 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 TPOP07202 933 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 LINGO3P0C6S8 592 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 ESRRAP11474 423 aaPredicted RBP15.35■□□□□ 0.05
USP39-211ENST00000465282 GABRA1P14867 456 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 UQCRBP14927 111 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 CPN1P15169 458 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 BMP7P18075 431 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 B3GALT5-AS1P59052 145 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 EEF1A1P68104 462 aaKnown RBP15.35■□□□□ 0.05
USP39-211ENST00000465282 KCNC4Q03721 635 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 GXYLT1Q4G148 440 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 SLC25A53Q5H9E4 307 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 MRPL2Q5T653 305 aaKnown RBP15.35■□□□□ 0.05
USP39-211ENST00000465282 RAET1LQ5VY80 246 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 ARSKQ6UWY0 536 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 CCDC80Q76M96 950 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 VRK2Q86Y07 508 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 RASSF5Q8WWW0 418 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 ST8SIA1Q92185 356 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 NSL1Q96IY1 281 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 MRGPRX4Q96LA9 322 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 TIMP4Q99727 224 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 UGT2B28Q9BY64 529 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 PRDM14Q9GZV8 571 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 TP63Q9H3D4 680 aaPredicted RBP15.35■□□□□ 0.05
USP39-211ENST00000465282 SPAG4Q9NPE6 437 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 ARL8BQ9NVJ2 186 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 SLC6A5Q9Y345 797 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 AP4B1Q9Y6B7 739 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 RELNP78509 3460 aa15.35■□□□□ 0.05
USP39-211ENST00000465282 OR2M5A3KFT3 312 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 AHRRA9YTQ3 701 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 FAM220BPB1ANY3 271 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 ETV2O00321 342 aaPredicted RBP15.34■□□□□ 0.05
USP39-211ENST00000465282 OIP5O43482 229 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 CYP7B1O75881 506 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 PEPDP12955 493 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 CCR4P51679 360 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 DLX5P56178 289 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 PSME3P61289 254 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 C4orf17Q53FE4 359 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 MTFR2Q6P444 385 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 DHRS4L2Q6PKH6 230 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 TRPM8Q7Z2W7 1104 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 ZNF550Q7Z398 422 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 DOLPP1Q86YN1 238 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 TNIP2Q8NFZ5 429 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 OR2T12Q8NG77 320 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 CMTM6Q9NX76 183 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 DNAJB12Q9NXW2 375 aaKnown RBP15.34■□□□□ 0.05
USP39-211ENST00000465282 ABCD2Q9UBJ2 740 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 VDAC3Q9Y277 283 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 SLC5A6Q9Y289 635 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 RPH3AQ9Y2J0 694 aaPredicted RBP15.34■□□□□ 0.05
USP39-211ENST00000465282 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
USP39-211ENST00000465282 TENM4Q6N022 2769 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms