RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 DUSP22Q9NRW4 184 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
HMGN1-210ENST00000464078 KLHL9Q9P2J3 617 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 GDF2Q9UK05 429 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-210ENST00000464078 CDC42EP3Q9UKI2 254 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 GPC6Q9Y625 555 aaPredicted RBP15.32■□□□□ 0.04
HMGN1-210ENST00000464078 ALPK2Q86TB3 2170 aa15.32■□□□□ 0.04
HMGN1-210ENST00000464078 G3V2L1 256 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 RGS14O43566 566 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 SEC22BO75396 215 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 NTN1O95631 604 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 ALOX5P09917 674 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 COX5AP20674 150 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 PRKAG1P54619 331 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 CDH11P55287 796 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 ANKRD26P1Q6NSI1 321 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 SZRD1Q7Z422 152 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 P2RY8Q86VZ1 359 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 PPCDCQ96CD2 204 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 STACQ99469 402 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 PSD2Q9BQI7 771 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 REEP4Q9H6H4 257 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 TMEM160Q9NX00 188 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 C1orf109Q9NX04 203 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
HMGN1-210ENST00000464078 EMCNQ9ULC0 261 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 ICAM5Q9UMF0 924 aa15.31■□□□□ 0.04
HMGN1-210ENST00000464078 IGHV4-30-2A0A087WSY4 118 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 ETV2O00321 342 aaPredicted RBP15.3■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF195O14628 629 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 RAMP1O60894 148 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 CRCPO75575 148 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 UROSP10746 265 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 SDC1P18827 310 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 YLPM1P49750 1951 aaKnown RBP15.3■□□□□ 0.04
HMGN1-210ENST00000464078 DSCR9P59020 149 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 POU6F2P78424 691 aaPredicted RBP15.3■□□□□ 0.04
HMGN1-210ENST00000464078 SELENBP1Q13228 472 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 PPA1Q15181 289 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 TIMM23BQ5SRD1 257 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 CCNJQ5T5M9 372 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 AGAP6Q5VW22 663 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 CBLN3Q6UW01 205 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 ZYG11AQ6WRX3 759 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 RNF165Q6ZSG1 346 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 OR10H5Q8NGA6 315 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 FBXO27Q8NI29 283 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 C16orf58Q96GQ5 468 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 RADILQ96JH8 1075 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 MRGPRX4Q96LA9 322 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 RHNO1Q9BSD3 238 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 TNFRSF12AQ9NP84 129 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 B3GALT5Q9Y2C3 310 aa15.3■□□□□ 0.04
HMGN1-210ENST00000464078 ELOA3DA6NLF2 546 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-210ENST00000464078 OIP5O43482 229 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 GPRIN2O60269 458 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 LYZL6O75951 148 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 MYL2P10916 166 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 PRKCAP17252 672 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ENPP1P22413 925 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 P2RX1P51575 399 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 C21orf58P58505 322 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 RAC3P60763 192 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 VLDLRP98155 873 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 LOXL1Q08397 574 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-210ENST00000464078 MLC1Q15049 377 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ELOA3BQ3SY89 546 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 TMEM176BQ3YBM2 270 aaPredicted RBP15.29■□□□□ 0.04
HMGN1-210ENST00000464078 KLHL26Q53HC5 615 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 SLC25A53Q5H9E4 307 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 C11orf71Q6IPW1 123 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ZNF527Q8NB42 609 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ELOA3Q8NG57 546 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 PHOSPHO1Q8TCT1 267 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 MUCL1Q96DR8 90 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 MTERF3Q96E29 417 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 FAM120BQ96EK7 910 aaKnown RBP15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ADAD1Q96M93 576 aaKnown RBP15.29■□□□□ 0.04
HMGN1-210ENST00000464078 HOXD1Q9GZZ0 328 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 PIGUQ9H490 435 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 CXorf36Q9H7Y0 433 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 DCDC2Q9UHG0 476 aa15.29■□□□□ 0.04
HMGN1-210ENST00000464078 ABCD4O14678 606 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 SSX4O60224 188 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 PGM3O95394 542 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 NUDT14O95848 222 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 HMGN2P05204 90 aaKnown RBP15.28■□□□□ 0.04
HMGN1-210ENST00000464078 PYGBP11216 843 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 NEFHP12036 1026 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 NUDT6P53370 316 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 DNAJB13P59910 316 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 WHAMMP3Q1A5X7 153 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
HMGN1-210ENST00000464078 GPR119Q8TDV5 335 aa15.28■□□□□ 0.04
HMGN1-210ENST00000464078 JADE3Q92613 823 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms