RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 CFLARO15519 480 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 EFNA2O43921 213 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 EIF4E2O60573 245 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 PABPC4LP0CB38 370 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 LOXP28300 417 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 HOXC12P31275 282 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 KCNJ5P48544 419 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 CTBP2P56545 445 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 FOXF1Q12946 379 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 FOXD4Q12950 439 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF141Q15928 474 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 PDCD2Q16342 344 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 GTF2IRD2BQ6EKJ0 949 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 OR4F3Q6IEY1 312 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 C6orf120Q7Z4R8 191 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 CROCCP2Q86T23 111 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 GTF2IRD2Q86UP8 949 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 CXorf67Q86X51 503 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 CPNE4Q96A23 557 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 TESCQ96BS2 214 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 MRGPRX4Q96LA9 322 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 PIP5K1AQ99755 562 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 SERHL2Q9H4I8 314 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 FANCFQ9NPI8 374 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 C6orf203Q9P0P8 240 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 CARD8Q9Y2G2 431 aa18.37■□□□□ 0.53
PDLIM4-205ENST00000463615 NPIPA5A0A0B4J1W7 369 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 GJE1A6NN92 205 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 NPIPA7E9PJI5 369 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF195O14628 629 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 PLGP00747 810 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 TUBBP07437 444 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 NPIPA8P0DM63 369 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 PRKCAP17252 672 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 SLC1A6P48664 564 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 CARD18P57730 90 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 MPP2Q14168 576 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF239Q16600 458 aaKnown RBP18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 HEPHL1Q6MZM0 1159 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 C22orf34Q6ZV56 151 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 CLECL1Q8IZS7 167 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 OR5D16Q8NGK9 328 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 OR5AK3PQ8NH89 298 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 FBXO27Q8NI29 283 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 RNF128Q8TEB7 428 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 TMEM185BQ9H7F4 350 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 TIGARQ9NQ88 270 aa18.36■□□□□ 0.53
PDLIM4-205ENST00000463615 PRSS51A0A1B0GVH4 220 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 WDR91A4D1P6 747 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 ESPNB1AK53 854 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF264O43296 627 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 OPN1LWP04000 364 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 MATN1P21941 496 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 SHC1P29353 583 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 AGTR1P30556 359 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 RNPS1Q15287 305 aaKnown RBP18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 DPY19L1Q2PZI1 675 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 PGS1Q32NB8 556 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 ARHGAP11BQ3KRB8 267 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 KRTAP21-3Q3LHN1 58 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 ANXA8L1Q5VT79 327 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 OGFOD2Q6N063 350 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 STAC2Q6ZMT1 411 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 BEND4Q6ZU67 534 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 KRTAP1-3Q8IUG1 177 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 LRRC75A-AS1Q8N1F1 130 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 OR5W2Q8NH69 310 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 DPY30Q9C005 99 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF350Q9GZX5 532 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 KCNE5Q9UJ90 142 aa18.35■□□□□ 0.53
PDLIM4-205ENST00000463615 RNF103-CHMP3A0A140T963 221 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 SERINC4A6NH21 518 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 GTPBP1O00178 669 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 STX11O75558 287 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 AGR2O95994 175 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 PSMB1P20618 241 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 SOAT1P35610 550 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 PHC1P78364 1004 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 SELENBP1Q13228 472 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 TOMM34Q15785 309 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 ZNF550Q7Z398 422 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 PIGTQ969N2 578 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 SLC35G5Q96KT7 338 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 LAT2Q9GZY6 243 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 COQ10BQ9H8M1 238 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 MEAF6Q9HAF1 191 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 CLEC4AQ9UMR7 237 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 PCDHGB4Q9UN71 923 aa18.34■□□□□ 0.53
PDLIM4-205ENST00000463615 NUDT14O95848 222 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 THBDP07204 575 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 UBL4AP11441 157 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 LBPP18428 481 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 FPR1P21462 350 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 UQCRC2P22695 453 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 SFTPDP35247 375 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 CLNS1AP54105 237 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 RPS26P62854 115 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 SKP2Q13309 424 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 CASP8Q14790 479 aa18.33■□□□□ 0.52
PDLIM4-205ENST00000463615 CEP85LQ5SZL2 805 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms