RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZBED6CLQ96FA7 236 aaPredicted RBP17.63■□□□□ 0.41
VARS-221ENST00000463184 KLHL15Q96M94 604 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 TMEM185BQ9H7F4 350 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 MANSC1Q9H8J5 431 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 NGBQ9NPG2 151 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 TIGARQ9NQ88 270 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 FBXO34Q9NWN3 711 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 ZDHHC2Q9UIJ5 367 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 CCL27Q9Y4X3 112 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 DNAJC15Q9Y5T4 150 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 PRR14LQ5THK1 2151 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 A0A1W2PQD3 144 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 RNF223E7ERA6 249 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 NPIPB8E9PQR5 432 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 SLC28A1O00337 649 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 SCDO00767 359 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 TBX19O60806 448 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 GCM2O75603 506 aaPredicted RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 ACP2P11117 423 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 MANFP55145 182 aaKnown RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 DMTNQ08495 405 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 RNPS1Q15287 305 aaKnown RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 UGT3A2Q3SY77 523 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 NCMAPQ5T1S8 102 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 ALKBH2Q6NS38 261 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 KIRREL3Q8IZU9 778 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 GABRG1Q8N1C3 465 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 SLC16A11Q8NCK7 471 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 LILRB1Q8NHL6 650 aaPredicted RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 B4GALNT2Q8NHY0 566 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 RNF128Q8TEB7 428 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 ROBO4Q8WZ75 1007 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 HSD17B8Q92506 261 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 CPNE4Q96A23 557 aaPredicted RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 SH3YL1Q96HL8 342 aaPredicted RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 MS4A4EQ96PG1 132 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 REPIN1Q9BWE0 567 aaKnown RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 REEP4Q9H6H4 257 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 ESRP2Q9H6T0 727 aaKnown RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 MED4Q9NPJ6 270 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 C1orf109Q9NX04 203 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 RAP2CQ9Y3L5 183 aa17.62■□□□□ 0.41
VARS-221ENST00000463184 CHD3Q12873 2000 aaKnown RBP17.62■□□□□ 0.41
VARS-221ENST00000463184 TMEM233B4DJY2 109 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 CD3EP07766 207 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 ALOX5P09917 674 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 LINGO3P0C6S8 592 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 DANCRP0C864 163 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 ELK4P28324 431 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 FRKP42685 505 aaPredicted RBP17.61■□□□□ 0.41
VARS-221ENST00000463184 ZNF239Q16600 458 aaKnown RBP17.61■□□□□ 0.41
VARS-221ENST00000463184 SFRP5Q5T4F7 317 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 ANKRD26P1Q6NSI1 321 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 TFAP2EQ6VUC0 442 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 SZRD1Q7Z422 152 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 ZAR1Q86SH2 424 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 AGR3Q8TD06 166 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 TWIST2Q8WVJ9 160 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 PPCDCQ96CD2 204 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 SORT1Q99523 831 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 USB1Q9BQ65 265 aaKnown RBP17.61■□□□□ 0.41
VARS-221ENST00000463184 REG4Q9BYZ8 158 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 C20orf27Q9GZN8 174 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 LRTM1Q9HBL6 345 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 GP6Q9HCN6 339 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 ACSS1Q9NUB1 689 aaPredicted RBP17.61■□□□□ 0.41
VARS-221ENST00000463184 THAP1Q9NVV9 213 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 SH3BP4Q9P0V3 963 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 HAO1Q9UJM8 370 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 COL6A5A8TX70 2615 aa17.61■□□□□ 0.41
VARS-221ENST00000463184 GJE1A6NN92 205 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 KLF11O14901 512 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 CLOCKO15516 846 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 RGS14O43566 566 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 SNNO75324 88 aaPredicted RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 SOD3P08294 240 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 IL32P24001 234 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 ADH6P28332 368 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 SFTPDP35247 375 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 DUSP5Q16690 384 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 ZNF385BQ569K4 471 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 DNAJC14Q6Y2X3 702 aaPredicted RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 MTERF4Q7Z6M4 381 aaKnown RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 TUSC5Q8IXB3 177 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 ZNF781Q8N8C0 355 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 MAPK1IP1LQ8NDC0 245 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 FBXO30Q8TB52 745 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 ABHD3Q8WU67 409 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 SMAP2Q8WU79 429 aaPredicted RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 ZNF75CPQ92670 426 aaPredicted RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 GTPBP3Q969Y2 492 aaKnown RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 CCT7Q99832 543 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 TUBB1Q9H4B7 451 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 INTS9Q9NV88 658 aaKnown RBP17.6■□□□□ 0.41
VARS-221ENST00000463184 KLHL13Q9P2N7 655 aa17.6■□□□□ 0.41
VARS-221ENST00000463184 AKAP10O43572 662 aa17.59■□□□□ 0.41
VARS-221ENST00000463184 PRKD3O94806 890 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms