RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 NUDT14O95848 222 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 PABPC4LP0CB38 370 aaKnown RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 LAMP1P11279 417 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 ATP6V1C1P21283 382 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 KRTAP1-1Q07627 177 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 PTGR1Q14914 329 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 RNPS1Q15287 305 aaKnown RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 KLHL26Q53HC5 615 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 CDC73Q6P1J9 531 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 ATG4DQ86TL0 474 aaPredicted RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 REXO5Q96IC2 774 aaKnown RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 TACO1Q9BSH4 297 aaKnown RBP14.32□□□□□ -0.12
COL7A1-204ENST00000462475 CXorf36Q9H7Y0 433 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 PPCSQ9HAB8 311 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 ADAM21Q9UKJ8 722 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 RNF115Q9Y4L5 304 aa14.32□□□□□ -0.12
COL7A1-204ENST00000462475 IGHV3-15A0A0B4J1V0 119 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ZNF195O14628 629 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 CLOCKO15516 846 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 SOX30O94993 753 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 C6orf47O95873 294 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 PRKCAP17252 672 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 IL32P24001 234 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ADH6P28332 368 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ALDH3A1P30838 453 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 P2RX1P51575 399 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 SUMO3P55854 103 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 RPS4XP62701 263 aaKnown RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TNK1Q13470 666 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TP53BP2Q13625 1128 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TAB1Q15750 504 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TMEM176BQ3YBM2 270 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 XKR7Q5GH72 579 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ARL13AQ5H913 290 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 DCST2Q5T1A1 773 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 SFRP5Q5T4F7 317 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 FCRLAQ7L513 359 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 BANPQ8N9N5 519 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ZNF527Q8NB42 609 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ATP6V1C2Q8NEY4 427 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ZFP90Q8TF47 636 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 NEUROG1Q92886 237 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 C1orf50Q9BV19 199 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 MECRQ9BV79 373 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ACTRT3Q9BYD9 372 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TIGARQ9NQ88 270 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 GPATCH2Q9NW75 528 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 ACTL7BQ9Y614 415 aa14.31□□□□□ -0.12
COL7A1-204ENST00000462475 GPC6Q9Y625 555 aaPredicted RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 FBN1P35555 2871 aaKnown RBP14.31□□□□□ -0.12
COL7A1-204ENST00000462475 TMEM114B3SHH9 223 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 NPIPB9F8W1W9 429 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 NPHS1O60500 1241 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 PEX11AO75192 247 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ADAP00813 363 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 SOD3P08294 240 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 FGF4P08620 206 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ENPP1P22413 925 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 CCT3P49368 545 aaKnown RBP14.3□□□□□ -0.12
COL7A1-204ENST00000462475 SPDYE7PQ495Y7 208 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 NCMAPQ5T1S8 102 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ADAM5Q6NVV9 412 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 SEZ6L2Q6UXD5 910 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 KRTCAP2Q8N6L1 136 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ZNF614Q8N883 585 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 MAPK1IP1LQ8NDC0 245 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 OR56A1Q8NGH5 318 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 PSMA8Q8TAA3 256 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 GPR119Q8TDV5 335 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ADAMTS15Q8TE58 950 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 OR5P2Q8WZ92 322 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 KISS1RQ969F8 398 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-204ENST00000462475 APOPT1Q96IL0 206 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 PPP3R2Q96LZ3 170 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 HDHD5Q9BXW7 423 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 MKS1Q9NXB0 559 aa14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ING1Q9UK53 422 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-204ENST00000462475 FAF1Q9UNN5 650 aaPredicted RBP14.3□□□□□ -0.12
COL7A1-204ENST00000462475 ATRQ13535 2644 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 A0A1W2PNR3 127 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 GJE1A6NN92 205 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 ZNF814B7Z6K7 855 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 H3BNH8 94 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 OVOL3O00110 214 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 GTPBP1O00178 669 aaKnown RBP14.29□□□□□ -0.12
COL7A1-204ENST00000462475 PRKD3O94806 890 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 CD3EP07766 207 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 DANCRP0C864 163 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
COL7A1-204ENST00000462475 MAPK1P28482 360 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 ARRB2P32121 409 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
COL7A1-204ENST00000462475 ATP12AP54707 1039 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 VEZF1Q14119 521 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 CLEC12BQ2HXU8 276 aa14.29□□□□□ -0.12
COL7A1-204ENST00000462475 ZCCHC23Q6ZST2 131 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms