RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ORAI1Q96D31 301 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 AHCYL2Q96HN2 611 aaKnown RBP10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 RBP7Q96R05 134 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 SLC6A20Q9NP91 592 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 DLL4Q9NR61 685 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 CDHR4A6H8M9 788 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 HIDE1A8MVS5 230 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 OR7A10O76100 309 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 PRNPP04156 253 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 RHOP08100 348 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 GALP22466 123 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 DNASE1P24855 282 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 BDH1Q02338 343 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 ZNF85Q03923 595 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 TMEM44Q2T9K0 475 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 FNDC3BQ53EP0 1204 aaKnown RBP10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 SLC48A1Q6P1K1 146 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 ABHD17CQ6PCB6 329 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 BHLHB9Q6PI77 547 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 LUZP2Q86TE4 346 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 ZNF527Q8NB42 609 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 PIGKQ92643 395 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 COX14Q96I36 57 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 OR2M2Q96R28 347 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 INSM2Q96T92 566 aaPredicted RBP10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 SATB2Q9UPW6 733 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 PLEKHM1Q9Y4G2 1056 aa10.9□□□□□ -0.66
PDZRN3-203ENST00000462146 PTPRSQ13332 1948 aa10.9□□□□□ -0.67
PDZRN3-203ENST00000462146 UNC119BA6NIH7 251 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 CDK2AP1O14519 115 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 HMGN1P05114 100 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SLC35G4P0C7Q5 338 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 CSNK2A2P19784 350 aaPredicted RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 HTR2AP28223 471 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 TEAD1P28347 426 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 PRKAR1BP31321 381 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ANXA11P50995 505 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF136P52737 540 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 RPL6Q02878 288 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 PRDX1Q06830 199 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 AANATQ16613 207 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZSWIM7Q19AV6 140 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ACSM3Q53FZ2 586 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 TMEM255AQ5JRV8 349 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 MRM1Q6IN84 353 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF765Q7L2R6 523 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 GET4Q7L5D6 327 aaPredicted RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 GID4Q8IVV7 300 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ARL14Q8N4G2 192 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 OR7G2Q8NG99 324 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 OR13C2Q8NGS9 318 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ANKRD19PQ9H560 264 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SYNDIG1Q9H7V2 258 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 KLHL28Q9NXS3 571 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF224Q9NZL3 707 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 KCMF1Q9P0J7 381 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 APOBEC3BQ9UH17 382 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 OR1A2Q9Y585 309 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 TRAV27A0A087WT01 109 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 PLPP2O43688 288 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SSNA1O43805 119 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 H2AFB2P0C5Z0 115 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SULT1A3P0DMM9 295 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SULT1A4P0DMN0 295 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 F8A1P23610 371 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 CDK3Q00526 305 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 GPR68Q15743 365 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZIC1Q15915 447 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 MAPK14Q16539 360 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ERN2Q76MJ5 926 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 OR4N5Q8IXE1 308 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 GJD3Q8N144 294 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ADAMTS15Q8TE58 950 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 KCTD12Q96CX2 325 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ZNF681Q96N22 645 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 NDC1Q9BTX1 674 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 C1QTNF7Q9BXJ2 289 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 SIDT1Q9NXL6 827 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 ATG2BQ96BY7 2078 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 TICRRQ7Z2Z1 1910 aa10.89□□□□□ -0.67
PDZRN3-203ENST00000462146 MEIKINA0A087WXM9 373 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 OR52A4PA6NMU1 304 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 SC5DO75845 299 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 OR5F1O95221 314 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 RAB3BP20337 219 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 PYCR1P32322 319 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 SHC2P98077 582 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 PUDPQ08623 228 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 COL28A1Q2UY09 1125 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 CHMP1BQ7LBR1 199 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 PXKQ7Z7A4 578 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 LSMEM1Q8N8F7 131 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 CXorf40AQ8TE69 158 aa10.88□□□□□ -0.67
PDZRN3-203ENST00000462146 HMGB4Q8WW32 186 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms