RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CTBP2P56545 445 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 STX3Q13277 289 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 DEFB113Q30KQ7 82 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 CROCCP2Q86T23 111 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 LRRC34Q8IZ02 419 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 CLEC4FQ8N1N0 589 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 FBXO27Q8NI29 283 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 GPR119Q8TDV5 335 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 KLHL15Q96M94 604 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 MED18Q9BUE0 208 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 NUF2Q9BZD4 464 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 GLRX2Q9NS18 164 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 ZNF226Q9NYT6 803 aa16.96■□□□□ 0.31
VARS-220ENST00000461874 C6orf203Q9P0P8 240 aaPredicted RBP16.96■□□□□ 0.31
VARS-220ENST00000461874 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
VARS-220ENST00000461874 RNF103-CHMP3A0A140T963 221 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 PRSS51A0A1B0GVH4 220 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 DEFB108AA8MXU0 73 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 ZNF195O14628 629 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 ANKRD28O15084 1053 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 SIAH2O43255 324 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 AK1P00568 194 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 LBPP18428 481 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 CRYGSP22914 178 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 SHC1P29353 583 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 CARD18P57730 90 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 PHC1P78364 1004 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 TOMM34Q15785 309 aaPredicted RBP16.95■□□□□ 0.3
VARS-220ENST00000461874 NDUFAF6Q330K2 333 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 ANXA8L1Q5VT79 327 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 ZNF614Q8N883 585 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 OR4A15Q8NGL6 344 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 TESCQ96BS2 214 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 SLC35G5Q96KT7 338 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 NMUR2Q9GZQ4 415 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 MEAF6Q9HAF1 191 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 PNPOQ9NVS9 261 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 PCDHGB4Q9UN71 923 aa16.95■□□□□ 0.3
VARS-220ENST00000461874 EIF4E2O60573 245 aaKnown RBP16.94■□□□□ 0.3
VARS-220ENST00000461874 FCMRO60667 390 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 STX11O75558 287 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 PRKCAP17252 672 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 KLK2P20151 261 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 SFTPDP35247 375 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 BST1Q10588 318 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 EXOC3L2Q2M3D2 409 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 ARHGAP11BQ3KRB8 267 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 PDZK1Q5T2W1 519 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 GTF2IRD2BQ6EKJ0 949 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 ZNF550Q7Z398 422 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 GTF2IRD2Q86UP8 949 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 ANKRD46Q86W74 232 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 OR5W2Q8NH69 310 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 MIPOL1Q8TD10 442 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 ZNF524Q96C55 264 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 ARSGQ96EG1 525 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 PAIP2Q9BPZ3 127 aaKnown RBP16.94■□□□□ 0.3
VARS-220ENST00000461874 KLHL4Q9C0H6 718 aa16.94■□□□□ 0.3
VARS-220ENST00000461874 UQCRHLA0A096LP55 91 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 SERINC4A6NH21 518 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 GJE1A6NN92 205 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 ZNF264O43296 627 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 NTN1O95631 604 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 CPSF4O95639 269 aaKnown RBP16.93■□□□□ 0.3
VARS-220ENST00000461874 PABPC4LP0CB38 370 aaKnown RBP16.93■□□□□ 0.3
VARS-220ENST00000461874 UBL4AP11441 157 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 NID1P14543 1247 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 CD53P19397 219 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 UQCRC2P22695 453 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 CLNS1AP54105 237 aaKnown RBP16.93■□□□□ 0.3
VARS-220ENST00000461874 PPP2R2AP63151 447 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 GPR68Q15743 365 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 ZNF141Q15928 474 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 TMEM176BQ3YBM2 270 aaPredicted RBP16.93■□□□□ 0.3
VARS-220ENST00000461874 SLC25A53Q5H9E4 307 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 HHATQ5VTY9 493 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 HEPHL1Q6MZM0 1159 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 C22orf34Q6ZV56 151 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 VPS37AQ8NEZ2 397 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 TOR1AIP2Q8NFQ8 470 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 ROBO4Q8WZ75 1007 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 MARK4Q96L34 752 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 MRGPRX4Q96LA9 322 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 ZNF350Q9GZX5 532 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 OR51I1Q9H343 314 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 TIGARQ9NQ88 270 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 KCNE5Q9UJ90 142 aa16.93■□□□□ 0.3
VARS-220ENST00000461874 ESPNB1AK53 854 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 ETV2O00321 342 aaPredicted RBP16.92■□□□□ 0.3
VARS-220ENST00000461874 CASP9P55211 416 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
VARS-220ENST00000461874 ADAM8P78325 824 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 CASP8Q14790 479 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 ZNF239Q16600 458 aaKnown RBP16.92■□□□□ 0.3
VARS-220ENST00000461874 DPY19L1Q2PZI1 675 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 SPANXN4Q5MJ08 99 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 ANKRD34AQ69YU3 496 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 OGFOD2Q6N063 350 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 C16orf62Q7Z3J2 963 aa16.92■□□□□ 0.3
VARS-220ENST00000461874 ANKRD42Q8N9B4 389 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms