RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 CDC26Q8NHZ8 85 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 PSMA8Q8TAA3 256 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 NPAS1Q99742 590 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 SRXN1Q9BYN0 137 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 EQTNQ9NQ60 294 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
DNMT3A-207ENST00000461228 MALRD1Q5VYJ5 2156 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 IGKV3D-15A0A087WSY6 115 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 PHF1O43189 567 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 CYTIPO60759 359 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 DNAJA2O60884 412 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ADAM11O75078 769 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 KRT16P08779 473 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 UROSP10746 265 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 GCAP28676 217 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 GPC1P35052 558 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 DNAJB13P59910 316 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 PDK3Q15120 406 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 PPA1Q15181 289 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ARL13AQ5H913 290 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 FAM219BQ5XKK7 198 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ABLIM2Q6H8Q1 611 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF551Q7Z340 670 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC16A11Q8NCK7 471 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 NUP43Q8NFH3 380 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 PPCDCQ96CD2 204 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 RHNO1Q9BSD3 238 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 REEP4Q9H6H4 257 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 TMEM185BQ9H7F4 350 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-207ENST00000461228 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 DPRXA6NFQ7 191 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 OR5H1A6NKK0 313 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 POC1B-GALNT4F8VUJ3 575 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 NPIPB9F8W1W9 429 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 H3BNH8 94 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 DNPH1O43598 174 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 GLRA3O75311 464 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 ALOX5P09917 674 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 PRKCAP17252 672 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 RPL3P39023 403 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 ASMTP46597 345 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 POU6F2P78424 691 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF544Q6NX49 715 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 TMEM108Q6UXF1 575 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 NUFIP2Q7Z417 695 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 NATD1Q8N6N6 113 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 MAPK1IP1LQ8NDC0 245 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC25A43Q8WUT9 341 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 TNFRSF13CQ96RJ3 184 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 TRMOQ9BU70 441 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 PIGUQ9H490 435 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 CBLN4Q9NTU7 201 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 CISD1Q9NZ45 108 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 MALT1Q9UDY8 824 aa12.88□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC28A1O00337 649 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 ADAP00813 363 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 SDC1P18827 310 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 GGT1P19440 569 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 PTAFRP25105 342 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 SHC1P29353 583 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 SFTPDP35247 375 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 NUDT6P53370 316 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 CASP9P55211 416 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 BTKQ06187 659 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 KLHL26Q53HC5 615 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 ZAR1Q86SH2 424 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 ST8SIA1Q92185 356 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 PROX1Q92786 737 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 ARL8AQ96BM9 186 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 FAM120BQ96EK7 910 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 EMC3Q9P0I2 261 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 PSMC3IPQ9P2W1 217 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 DCDC2Q9UHG0 476 aa12.87□□□□□ -0.35
DNMT3A-207ENST00000461228 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 G3V2L1 256 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms