RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 EPHA3P29320 983 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 SHC1P29353 583 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CCKARP32238 428 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CD79BP40259 229 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 ART1P52961 327 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 IST1P53990 364 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CASP9P55211 416 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 NME5P56597 212 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 UFM1P61960 85 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 FAM27E3Q08E93 113 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 ZNF141Q15928 474 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 ARHGAP11BQ3KRB8 267 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 FBXW10Q5XX13 1052 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 SAXO2Q658L1 398 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 HBMQ6B0K9 141 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 FAM214BQ7L5A3 538 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 OLIG3Q7RTU3 272 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 C16orf62Q7Z3J2 963 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 SPATA19Q7Z5L4 167 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 LILRA2Q8N149 483 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 GPR119Q8TDV5 335 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 NEURL3Q96EH8 262 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 KLHL15Q96M94 604 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 CCDC115Q96NT0 180 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 PRRG4Q9BZD6 226 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 WDR55Q9H6Y2 383 aaPredicted RBP16.96■□□□□ 0.31
COL5A1-203ENST00000460264 EXD2Q9NVH0 621 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 NKIRAS1Q9NYS0 192 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 KCNE5Q9UJ90 142 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 MCTS1Q9ULC4 181 aaKnown RBP16.96■□□□□ 0.31
COL5A1-203ENST00000460264 TESMINQ9Y4I5 508 aa16.96■□□□□ 0.31
COL5A1-203ENST00000460264 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
COL5A1-203ENST00000460264 GOLGA8QA0A0J9YX86 632 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 CENPVL1A0A0U1RR11 272 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 GOLGA8OA6NCC3 632 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 SERINC4A6NH21 518 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 TRPC5OSA6NMA1 111 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 C9JVG2 144 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 GOLGA8NF8WBI6 632 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF264O43296 627 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 PRKCAP17252 672 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 ADH6P28332 368 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 S100A3P33764 101 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 SFTPDP35247 375 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 GPR68Q15743 365 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 TOMM34Q15785 309 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-203ENST00000460264 ATG16L1Q676U5 607 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 TNFAIP8L2Q6P589 184 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-203ENST00000460264 TMCO5AQ8N6Q1 288 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 OR5W2Q8NH69 310 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 FBXO27Q8NI29 283 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF524Q96C55 264 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 ARSGQ96EG1 525 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 GMPPAQ96IJ6 420 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-203ENST00000460264 SLC35A5Q9BS91 424 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 NDRG3Q9UGV2 375 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 BTNL2Q9UIR0 455 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 PROCRQ9UNN8 238 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 GPR45Q9Y5Y3 372 aa16.95■□□□□ 0.3
COL5A1-203ENST00000460264 EFNA2O43921 213 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 KIAA0513O60268 411 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 EIF4E2O60573 245 aaKnown RBP16.94■□□□□ 0.3
COL5A1-203ENST00000460264 SS18L1O75177 396 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-203ENST00000460264 UGT2B17O75795 530 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 SYNGR4O95473 234 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 NTN1O95631 604 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 AGR2O95994 175 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 PLGP00747 810 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-203ENST00000460264 HRGP04196 525 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 OR12D1P0DN82 309 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 KITP10721 976 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 CD1EP15812 388 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 IL12AP29459 219 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 UGT2B10P36537 528 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 KHKP50053 298 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 FUT5Q11128 374 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 SKP2Q13309 424 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 PDSS1Q5T2R2 415 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 ATAD3BQ5T9A4 648 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 RAB8BQ92930 207 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 SLC39A3Q9BRY0 314 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 CCM2LQ9NUG4 571 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-203ENST00000460264 ELOVL5Q9NYP7 299 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 MKLN1Q9UL63 735 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 CLEC4AQ9UMR7 237 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 PLEKHA6Q9Y2H5 1048 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 EMC9Q9Y3B6 208 aa16.94■□□□□ 0.3
COL5A1-203ENST00000460264 PRRC2AP48634 2157 aaKnown RBP16.94■□□□□ 0.3
COL5A1-203ENST00000460264 SLCO1B7G3V0H7 640 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF195O14628 629 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 GUSBP08236 651 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 NID1P14543 1247 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 POU2F1P14859 743 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 CHI3L1P36222 383 aaPredicted RBP16.93■□□□□ 0.3
COL5A1-203ENST00000460264 CCR4P51679 360 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 CTBP2P56545 445 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 POU4F3Q15319 338 aa16.93■□□□□ 0.3
COL5A1-203ENST00000460264 ZNF239Q16600 458 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms