RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 VRK1Q99986 396 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 NDUFB2O95178 105 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 CA3P07451 260 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 RPS18P62269 152 aaKnown RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 TAP2Q03519 686 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 APMAPQ9HDC9 416 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 OR5K4A6NMS3 321 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 PFKMP08237 780 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 EXOSC6Q5RKV6 272 aaKnown RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 AGAP7PQ5VUJ5 663 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 AGAP6Q5VW22 663 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 ZNF836Q6ZNA1 936 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 ZC3H3Q8IXZ2 948 aaKnown RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 AGAP4Q96P64 663 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 OR7D2Q96RA2 312 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 ADOQ96SZ5 270 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 FAM86C1Q9NVL1 165 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 ZNF736B4DX44 427 aaPredicted RBP18.47■□□□□ 0.55
SNX27-204ENST00000458013 AKAIN1P0CW23 69 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 MAOAP21397 527 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 ABHD17BQ5VST6 288 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 OR7G2Q8NG99 324 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 WWTR1Q9GZV5 400 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 OLAHQ9NV23 265 aa18.47■□□□□ 0.55
SNX27-204ENST00000458013 SDC1P18827 310 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 HMGCLP35914 325 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ACTBP60709 375 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ACTG1P63261 375 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 SPCS2Q15005 226 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 PODNL1Q6PEZ8 512 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ATOH1Q92858 354 aaPredicted RBP18.46■□□□□ 0.55
SNX27-204ENST00000458013 LRRC46Q96FV0 321 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 PELI2Q9HAT8 420 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ANKRD30BLA7E2S9 258 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 CD300LBA8K4G0 201 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 LRRTM2O43300 516 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 TXNL1O43396 289 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 TUSC2O75896 110 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 CLDN12P56749 244 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 FGL2Q14314 439 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 UNC5DQ6UXZ4 953 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 STEAP2Q8NFT2 490 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 OR7G3Q8NG95 312 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 SORT1Q99523 831 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 NDUFAF4Q9P032 175 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 SLAMF8Q9P0V8 285 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 RASD1Q9Y272 281 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ANKRD33BA6NCL7 494 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 AP1G1O43747 822 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 RPA2P15927 270 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 DCTP40126 519 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 GSCP56915 257 aaPredicted RBP18.46■□□□□ 0.55
SNX27-204ENST00000458013 CTSL3PQ5NE16 218 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 RSC1A1Q92681 617 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 SYT3Q9BQG1 590 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 PINK1Q9BXM7 581 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 RLIMQ9NVW2 624 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 TAS2R16Q9NYV7 291 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 SMN1Q16637 294 aaKnown RBP18.46■□□□□ 0.55
SNX27-204ENST00000458013 EMC10Q5UCC4 262 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 NDUFAF7Q7L592 441 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ACVR1CQ8NER5 493 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 TRMT2BQ96GJ1 504 aaKnown RBP18.46■□□□□ 0.55
SNX27-204ENST00000458013 HYLS1Q96M11 299 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 OBP2BQ9NPH6 170 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ACOT13Q9NPJ3 140 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 TMEM100Q9NV29 134 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 GMPR2Q9P2T1 348 aaKnown RBP18.46■□□□□ 0.55
SNX27-204ENST00000458013 COPS3Q9UNS2 423 aa18.46■□□□□ 0.55
SNX27-204ENST00000458013 ZNF780AO75290 641 aaPredicted RBP18.46■□□□□ 0.54
SNX27-204ENST00000458013 DDCP20711 480 aa18.46■□□□□ 0.54
SNX27-204ENST00000458013 VASH1Q7L8A9 365 aaPredicted RBP18.46■□□□□ 0.54
SNX27-204ENST00000458013 KDM1BQ8NB78 822 aa18.46■□□□□ 0.54
SNX27-204ENST00000458013 FIBINQ8TAL6 211 aa18.46■□□□□ 0.54
SNX27-204ENST00000458013 TUBB1Q9H4B7 451 aa18.46■□□□□ 0.54
SNX27-204ENST00000458013 IL37Q9NZH6 218 aa18.46■□□□□ 0.54
SNX27-204ENST00000458013 SLC16A7O60669 478 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 RNF4P78317 190 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 KNDC1Q76NI1 1749 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 ZNF487B1APH4 448 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 H3BNC9 293 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 ILKQ13418 452 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 C18orf63Q68DL7 685 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 PIANPQ8IYJ0 282 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 ST7LQ8TDW4 575 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 ZFAND2BQ8WV99 257 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 NANOS1Q8WY41 292 aaKnown RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 ENSAO43768 121 aaKnown RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 VASPP50552 380 aaPredicted RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 ZNF486Q96H40 463 aaPredicted RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 BIN3Q9NQY0 253 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 NUBP2Q9Y5Y2 271 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 STK17BO94768 372 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 ZNF865P0CJ78 1059 aaPredicted RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 PROZP22891 400 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 OR1D4P47884 311 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 DAP3P51398 398 aaKnown RBP18.45■□□□□ 0.54
SNX27-204ENST00000458013 CTSCP53634 463 aa18.45■□□□□ 0.54
SNX27-204ENST00000458013 TAS2R20P59543 309 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms