RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 BTBD2Q9BX70 525 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 SLCO5A1Q9H2Y9 848 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 GSTO2Q9H4Y5 243 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 REEP4Q9H6H4 257 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 YAE1D1Q9NRH1 226 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 DUSP22Q9NRW4 184 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 C1orf109Q9NX04 203 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 GIN1Q9NXP7 522 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 KLHL9Q9P2J3 617 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 CDC42EP3Q9UKI2 254 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 LIPT1Q9Y234 373 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 TMED5Q9Y3A6 229 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 ACTL7BQ9Y614 415 aa7.14□□□□□ -1.27
NIF3L1-209ENST00000454952 A8MV72 311 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 GLRA3O75311 464 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 GCM2O75603 506 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 NUDT14O95848 222 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SOD3P08294 240 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 LINGO3P0C6S8 592 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SLC7A1P30825 629 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SFTPDP35247 375 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 DNAJB13P59910 316 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 POU6F2P78424 691 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SELENBP1Q13228 472 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 TAB1Q15750 504 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 CCDC153Q494R4 210 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 MFSD12Q6NUT3 480 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 LRIG3Q6UXM1 1119 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 ZYG11AQ6WRX3 759 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 RNF165Q6ZSG1 346 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 Q6ZT83 130 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 FRMD7Q6ZUT3 714 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 FCRLAQ7L513 359 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 BHLHA15Q7RTS1 189 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF551Q7Z340 670 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 DTX2Q86UW9 622 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 NATD1Q8N6N6 113 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 CEP112Q8N8E3 955 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 GATSQ8NAP1 163 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 RAB3IL1Q8TBN0 382 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 RNF217Q8TC41 542 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 ABHD3Q8WU67 409 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 NANOS1Q8WY41 292 aaKnown RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 JADE3Q92613 823 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SH3YL1Q96HL8 342 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 MRGPRX4Q96LA9 322 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM185BQ9H7F4 350 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 BCO1Q9HAY6 547 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 CISD1Q9NZ45 108 aaKnown RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 SH3BP4Q9P0V3 963 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 PSMC3IPQ9P2W1 217 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 LPAR3Q9UBY5 353 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 MID2Q9UJV3 735 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF232Q9UNY5 417 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 MGAT4BQ9UQ53 548 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 MAGED1Q9Y5V3 778 aaPredicted RBP7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 PLCE1Q9P212 2302 aa7.13□□□□□ -1.27
NIF3L1-209ENST00000454952 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM114B3SHH9 223 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 GTPBP1O00178 669 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 UBFD1O14562 309 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ZNF195O14628 629 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 URI1O94763 535 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ADAP00813 363 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 OPN1LWP04000 364 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 THBS1P07996 1170 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CSF3P09919 207 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FAM157CP0CG43 387 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ACP2P11117 423 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 BMP4P12644 408 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 NID1P14543 1247 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ACVR1BP36896 505 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 HPCAL1P37235 193 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CDKN1AP38936 164 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FRKP42685 505 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 OR3A2P47893 321 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CCT5P48643 541 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 P2RX1P51575 399 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FOXA1P55317 472 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 RAC3P60763 192 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 BSPH1Q075Z2 132 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FAPQ12884 760 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 FOXF1Q12946 379 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 PDE7AQ13946 482 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 MLC1Q15049 377 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 PPA1Q15181 289 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 DUSP5Q16690 384 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 PRSS53Q2L4Q9 553 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TMEM176BQ3YBM2 270 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 ARL13AQ5H913 290 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TIMM23BQ5SRD1 257 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 UBAP2Q5T6F2 1119 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 C1QTNF12Q5T7M4 302 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 KLHL17Q6TDP4 642 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 CLEC2AQ6UVW9 174 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
NIF3L1-209ENST00000454952 DNM1P46Q6ZS02 220 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms