RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CACNG6Q9BXT2 260 aa12.65□□□□□ -0.38
LYSMD3-202ENST00000453259 EQTNQ9NQ60 294 aa12.65□□□□□ -0.38
LYSMD3-202ENST00000453259 DUSP22Q9NRW4 184 aa12.65□□□□□ -0.38
LYSMD3-202ENST00000453259 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 OR5H1A6NKK0 313 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF195O14628 629 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 GPRIN2O60269 458 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 OPN1LWP04000 364 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 ALOX5P09917 674 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 DHRS4L1P0CG22 281 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 HNF1AP20823 631 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 PRPH2P23942 346 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC7A1P30825 629 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 PRIM2P49643 509 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 GZMKP49863 264 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 P2RX1P51575 399 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 FOXF1Q12946 379 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 HSPB3Q12988 150 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 TSC22D1Q15714 1073 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 C8orf74Q6P047 294 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 DEPDC4Q8N2C3 294 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF619Q8N2I2 560 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 COX18Q8N8Q8 333 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 NUP43Q8NFH3 380 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 FAM168AQ92567 244 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 STACQ99469 402 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 NPAS1Q99742 590 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 CCT7Q99832 543 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 PSD2Q9BQI7 771 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 C19orf24Q9BVV8 132 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 SRXN1Q9BYN0 137 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 TIMM22Q9Y584 194 aa12.64□□□□□ -0.39
LYSMD3-202ENST00000453259 ANK2Q01484 3957 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 A0A087WUV0 522 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ESYT3A0FGR9 886 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 NDUFS8O00217 210 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ETV2O00321 342 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 UBFD1O14562 309 aaKnown RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 CYTIPO60759 359 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 RAMP1O60894 148 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 NTN1O95631 604 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 GSTA1P08263 222 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 SRD5A1P18405 259 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 C21orf58P58505 322 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 IRX1P78414 480 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF117Q03924 483 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 STK11Q15831 433 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 TMEM176BQ3YBM2 270 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC25A53Q5H9E4 307 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF551Q7Z340 670 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 MUC15Q8N387 334 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 CEP112Q8N8E3 955 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 GATSQ8NAP1 163 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC16A11Q8NCK7 471 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 MTERF3Q96E29 417 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 EMC3Q9P0I2 261 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 TMEM216Q9P0N5 145 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 POLR3HQ9Y535 204 aaPredicted RBP12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 CADP27708 2225 aa12.63□□□□□ -0.39
LYSMD3-202ENST00000453259 LMX1BO60663 402 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 LYZL6O75951 148 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 NUDT14O95848 222 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 KRT16P08779 473 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 ACP2P11117 423 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 PRKCAP17252 672 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 ATP6V1C1P21283 382 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 ENPP1P22413 925 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 SHC1P29353 583 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 EFNA4P52798 201 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 POU6F2P78424 691 aaPredicted RBP12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 CHRNB3Q05901 458 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 RASGEF1BQ0VAM2 473 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 PDE7AQ13946 482 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 MLC1Q15049 377 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 PDK3Q15120 406 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 CD226Q15762 336 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 DUSP5Q16690 384 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 FAM166AQ6J272 317 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 C3orf33Q6P1S2 294 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 RNF165Q6ZSG1 346 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 GALNT5Q7Z7M9 940 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 ATG4DQ86TL0 474 aaPredicted RBP12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 PPCDCQ96CD2 204 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms