RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 IRGQQ8WZA9 623 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NUS1Q96E22 293 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CEP19Q96LK0 163 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 FCRL5Q96RD9 977 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 KXD1Q9BQD3 176 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 APOL2Q9BQE5 337 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 THAP7Q9BT49 309 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF703Q9H7S9 590 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NMRAL1Q9HBL8 299 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACKR4Q9NPB9 350 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 RNF146Q9NTX7 359 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NECAP2Q9NVZ3 263 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 TECRQ9NZ01 308 aaKnown RBP3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF319Q9P2F9 582 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 KIF25Q9UIL4 384 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 PADI3Q9ULW8 664 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPIPA1Q9UND3 350 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 MMP24Q9Y5R2 645 aa3.97□□□□□ -1.77
HMGB3P21-201ENST00000452483 CNTNAP2Q9UHC6 1331 aa3.96□□□□□ -1.77
HMGB3P21-201ENST00000452483 FHAD1B1AJZ9 1412 aa3.96□□□□□ -1.77
HMGB3P21-201ENST00000452483 NPIPA5A0A0B4J1W7 369 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A1W2PNV4 684 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GOLGA6L10A6NI86 522 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF732B4DXR9 585 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 NPIPA5E9PKD4 350 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 H0YIZ8 118 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 RHODO00212 210 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SH2D1BO14796 132 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 AQP9O43315 295 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SRPX2O60687 465 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRKRAO75569 313 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ADAP1O75689 374 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 B3GAT3O94766 335 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 NXPH2O95156 264 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 LDOC1O95751 146 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ASS1P00966 412 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 FGGP02679 453 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 IFNW1P05000 195 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 IGF1P05019 195 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPIP06744 558 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 DCNP07585 359 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF7P17097 686 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRPS1L1P21108 318 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 BGNP21810 368 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPX3P22352 226 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 AADACP22760 399 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 HLA-DMAP28067 261 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 HTR2CP28335 458 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 HSD11B1P28845 292 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 EPHA2P29317 976 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRDX3P30048 256 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACVRL1P37023 503 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 KIR3DL2P43630 455 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TGM4P49221 684 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SGSHP51688 502 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 KPNA2P52292 529 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 HSPA2P54652 639 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 CDH12P55289 794 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 UBE2KP61086 200 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OC90Q02509 493 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GHRHRQ02643 423 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GUCY2DQ02846 1103 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLRC3Q07444 240 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 RBBP4Q09028 425 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SELENBP1Q13228 472 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ITGA9Q13797 1035 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SERTAD2Q14140 314 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC17A1Q14916 467 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TNXAQ16473 311 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 C2CD6Q53TS8 623 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 AWAT1Q58HT5 328 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 BEND6Q5SZJ8 279 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 C1QL3Q5VWW1 255 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 IGFL4Q6B9Z1 124 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ADAM5Q6NVV9 412 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ENPP6Q6UWR7 440 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF562Q6V9R5 426 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMPRSS11AQ6ZMR5 421 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 RTL4Q6ZR62 310 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 MOB2Q70IA6 237 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SHFQ7M4L6 423 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 COX8CQ7Z4L0 72 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SETD3Q86TU7 594 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 HPS6Q86YV9 775 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPALPP1Q8IXQ4 340 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF100Q8IYN0 542 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 LNX2Q8N448 690 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 JAGN1Q8N5M9 183 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TRAM1L1Q8N609 369 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TERB1Q8NA31 727 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 B3GNT7Q8NFL0 401 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 DMBX1Q8NFW5 382 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR11H4Q8NGC9 324 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR52I1Q8NGK6 324 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR4C15Q8NGM1 316 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5M1Q8NGP8 315 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR13C5Q8NGS8 318 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms