RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NTN1O95631 604 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 TUBBP07437 444 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PRKCAP17252 672 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 MATN1P21941 496 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 CRYGSP22914 178 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 ADH6P28332 368 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 STX3Q13277 289 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 TOMM34Q15785 309 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-208ENST00000452047 HBMQ6B0K9 141 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 HEPHL1Q6MZM0 1159 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 OGFOD2Q6N063 350 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PPP4R4Q6NUP7 873 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 C22orf34Q6ZV56 151 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 CROCCP2Q86T23 111 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 ANKRD46Q86W74 232 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 LILRA2Q8N149 483 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 GPR119Q8TDV5 335 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 SLC35G5Q96KT7 338 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 MARK4Q96L34 752 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 SLC39A3Q9BRY0 314 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 MED18Q9BUE0 208 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 DPY30Q9C005 99 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF350Q9GZX5 532 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 KCNK9Q9NPC2 374 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PNPOQ9NVS9 261 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 C6orf203Q9P0P8 240 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-208ENST00000452047 KCNE5Q9UJ90 142 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 CLEC4AQ9UMR7 237 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 EMC9Q9Y3B6 208 aa11.16□□□□□ -0.62
CPSF4-208ENST00000452047 GPC6Q9Y625 555 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-208ENST00000452047 PRSS51A0A1B0GVH4 220 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 DUXAA6NLW8 204 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 CASKO14936 926 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF264O43296 627 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 FCMRO60667 390 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 DNAJA2O60884 412 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SYNGR4O95473 234 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 NUDT14O95848 222 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 AK1P00568 194 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 PLGP00747 810 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ALDOCP09972 364 aaKnown RBP11.15□□□□□ -0.62
CPSF4-208ENST00000452047 UBL4AP11441 157 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 LBPP18428 481 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 CD53P19397 219 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 AGTR1P30556 359 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SFTPDP35247 375 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 KCNJ5P48544 419 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
CPSF4-208ENST00000452047 FUT5Q11128 374 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SKP2Q13309 424 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 KEAP1Q14145 624 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 CASP8Q14790 479 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF141Q15928 474 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF239Q16600 458 aaKnown RBP11.15□□□□□ -0.62
CPSF4-208ENST00000452047 DPY19L1Q2PZI1 675 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ARHGAP11BQ3KRB8 267 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SLC25A53Q5H9E4 307 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SPANXN4Q5MJ08 99 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 PDZK1Q5T2W1 519 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 OLIG3Q7RTU3 272 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF550Q7Z398 422 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF614Q8N883 585 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 OR4A15Q8NGL6 344 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 OR5W2Q8NH69 310 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 FBXO27Q8NI29 283 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 RNF128Q8TEB7 428 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 OSTF1Q92882 214 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ARSGQ96EG1 525 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 TEX37Q96LM6 180 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 ZNF226Q9NYT6 803 aa11.15□□□□□ -0.62
CPSF4-208ENST00000452047 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 SERINC4A6NH21 518 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 E9PBE3 544 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 GTPBP1O00178 669 aaKnown RBP11.14□□□□□ -0.63
CPSF4-208ENST00000452047 SDHDO14521 159 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 ZNF195O14628 629 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 KIAA0513O60268 411 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
CPSF4-208ENST00000452047 STX11O75558 287 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 UGT2B17O75795 530 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 GUSBP08236 651 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 KLK2P20151 261 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 UQCRC2P22695 453 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 LOXP28300 417 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-208ENST00000452047 CLNS1AP54105 237 aaKnown RBP11.14□□□□□ -0.63
CPSF4-208ENST00000452047 CASP9P55211 416 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 CTBP2P56545 445 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 CARD18P57730 90 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 GPR68Q15743 365 aa11.14□□□□□ -0.63
CPSF4-208ENST00000452047 FAM174BQ3ZCQ3 159 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms