RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PANX1Q96RD7 426 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 SDF2Q99470 211 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 ZBTB18Q99592 522 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 INPP5KQ9BT40 448 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 HOXD1Q9GZZ0 328 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 MANSC1Q9H8J5 431 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 RNF122Q9H9V4 155 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 RASSF1Q9NS23 344 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
USP54-207ENST00000451492 EXD2Q9NVH0 621 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 KLHL28Q9NXS3 571 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 STOML1Q9UBI4 398 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 MCTS1Q9ULC4 181 aaKnown RBP8.69□□□□□ -1.02
USP54-207ENST00000451492 PROCRQ9UNN8 238 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 DTNAQ9Y4J8 743 aa8.69□□□□□ -1.02
USP54-207ENST00000451492 IGHV3-15A0A0B4J1V0 119 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 PRSS51A0A1B0GVH4 220 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 A8MXE2 369 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ANKRD28O15084 1053 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF264O43296 627 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 DIAPH2O60879 1101 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 SCN2BO60939 215 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 STX11O75558 287 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 UGT2B17O75795 530 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 CSTAP01040 98 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 LINGO3P0C6S8 592 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 EPXP11678 715 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 FCGR2AP12318 317 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 IST1P53990 364 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 RAC1P63000 192 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 OCRLQ01968 901 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 FUT5Q11128 374 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 CBFBQ13951 182 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 QPRTQ15274 297 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 DPY19L1Q2PZI1 675 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 CTU2Q2VPK5 515 aaKnown RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 ARHGAP11BQ3KRB8 267 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 PDSS1Q5T2R2 415 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ATAD3BQ5T9A4 648 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 SAXO2Q658L1 398 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 OGFOD2Q6N063 350 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF474Q6S9Z5 364 aaPredicted RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF621Q6ZSS3 439 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ESPNLQ6ZVH7 1005 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 MAVSQ7Z434 540 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 SPATA19Q7Z5L4 167 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 RNF130Q86XS8 419 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF610Q8N9Z0 462 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 CHDHQ8NE62 594 aaPredicted RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 TOR1AIP2Q8NFQ8 470 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 GPR119Q8TDV5 335 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ACTRT2Q8TDY3 377 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF524Q96C55 264 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ROPN1LQ96C74 230 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ADGRG7Q96K78 797 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 KLHL15Q96M94 604 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 OR52E6Q96RD3 313 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 MED18Q9BUE0 208 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 THUMPD3Q9BV44 507 aaKnown RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 SRXN1Q9BYN0 137 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 KLHL4Q9C0H6 718 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 QRSL1Q9H0R6 528 aaKnown RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 HHATLQ9HCP6 504 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 C6orf203Q9P0P8 240 aaPredicted RBP8.68□□□□□ -1.02
USP54-207ENST00000451492 KCNE5Q9UJ90 142 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ICAM5Q9UMF0 924 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 EMC9Q9Y3B6 208 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 ZNF175Q9Y473 711 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 WDR45Q9Y484 360 aa8.68□□□□□ -1.02
USP54-207ENST00000451492 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 SERINC4A6NH21 518 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 DUXAA6NLW8 204 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 CLDN24A6NM45 220 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 NPIPB9F8W1W9 429 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 ZNF195O14628 629 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 MSTNO14793 375 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 CASKO14936 926 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 KIAA0513O60268 411 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 BCAS1O75363 584 aaPredicted RBP8.67□□□□□ -1.02
USP54-207ENST00000451492 ANP32DO95626 131 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 NTN1O95631 604 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 AK1P00568 194 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 PGRP06401 933 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 CRHP06850 196 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 PRKCAP17252 672 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 PSMA4P25789 261 aaKnown RBP8.67□□□□□ -1.02
USP54-207ENST00000451492 SLC7A1P30825 629 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 CCKARP32238 428 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 RYKP34925 604 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 CD79BP40259 229 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 MAPK14Q16539 360 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 SYPL1Q16563 259 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 ZNF239Q16600 458 aaKnown RBP8.67□□□□□ -1.02
USP54-207ENST00000451492 TMEM176BQ3YBM2 270 aaPredicted RBP8.67□□□□□ -1.02
USP54-207ENST00000451492 TIGD2Q4W5G0 525 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 COX20Q5RI15 118 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 TYW3Q6IPR3 259 aaKnown RBP8.67□□□□□ -1.02
USP54-207ENST00000451492 ALKBH2Q6NS38 261 aa8.67□□□□□ -1.02
USP54-207ENST00000451492 FRRS1Q6ZNA5 592 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms