RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	TMEM19	Q96HH6	336 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	HCAR1	Q9BXC0	346 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	PIGU	Q9H490	435 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	RIBC2	Q9H4K1	309 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	DDX31	Q9H8H2	851 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	GALNT9	Q9HCQ5	603 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	TINAG	Q9UJW2	476 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	C16orf97	H3BN30	126 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	RAD51D	O75771	328 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	DXO	O77932	396 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	CYC1	P08574	325 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	FPR1	P21462	350 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	FKBP2	P26885	142 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	EVI2B	P34910	448 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	IDH3G	P51553	393 aa	Predicted RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	GMFB	P60983	142 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	PCLAF	Q15004	111 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	GGTA1P	Q4G0N0	100 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	WBP2NL	Q6ICG8	309 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	FIP1L1	Q6UN15	594 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	SLC16A14	Q7RTX9	510 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	FBXO27	Q8NI29	283 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	UBTD2	Q8WUN7	234 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	HAS2	Q92819	552 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	C7orf26	Q96N11	449 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	OR7D2	Q96RA2	312 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	PITX2	Q99697	317 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	ORAI3	Q9BRQ5	295 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	SEMA4C	Q9C0C4	833 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	SSU72	Q9NP77	194 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	SCN3B	Q9NY72	215 aa		7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	WARS2	Q9UGM6	360 aa	Known RBP	7.78	□□□□□ -1.16
HCG18-238	ENST00000449544	NIN	Q8N4C6	2090 aa		7.77	□□□□□ -1.16
HCG18-238	ENST00000449544	NOTCH4	Q99466	2003 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	BTBD17	A6NE02	478 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TNFRSF11B	O00300	401 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ITM2A	O43736	263 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	GKN3P	P0CG01	181 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ETFA	P13804	333 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	MYL12A	P19105	171 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TACR3	P29371	465 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	MLF1	P58340	268 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	DUSP8	Q13202	625 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	CEACAM7	Q14002	265 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	GRB7	Q14451	532 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SNAPC1	Q16533	368 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	C3AR1	Q16581	482 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TMEM108	Q6UXF1	575 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SPATC1	Q76KD6	591 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	FCRLA	Q7L513	359 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ANKRD53	Q8N9V6	530 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	OR9I1	Q8NGQ6	314 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SH3GL3	Q99963	347 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	HDHD5	Q9BXW7	423 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	GLIPR2	Q9H4G4	154 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SP140L	Q9H930	580 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TUBA8	Q9NY65	449 aa	Predicted RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	KLHL13	Q9P2N7	655 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	USF3	Q68DE3	2245 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TAPBP	O15533	448 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	H1F0	P07305	194 aa	Known RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	CALB2	P22676	271 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ABCD3	P28288	659 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SLC6A12	P48065	614 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	CDK9	P50750	372 aa	Known RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	RPS6KA3	P51812	740 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	POLR2H	P52434	150 aa	Known RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	PRPS1	P60891	318 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	CDC42	P60953	191 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SELENBP1	Q13228	472 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	BEND4	Q6ZU67	534 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SLC16A11	Q8NCK7	471 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	NAXE	Q8NCW5	288 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	LMF2	Q9BU23	707 aa	Known RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	MYLK2	Q9H1R3	596 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ANKRA2	Q9H9E1	313 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	USE1	Q9NZ43	259 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	PCDHB14	Q9Y5E9	798 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	FKBP7	Q9Y680	259 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SCN3A	Q9NY46	2000 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544		A0A1W2PNR3	127 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	hCG_2039718	K7EN88	272 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ADAMDEC1	O15204	470 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	PRICKLE3	O43900	615 aa	Predicted RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SUSD5	O60279	629 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	INMT	O95050	263 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	ACTL6A	O96019	429 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TLE4	Q04727	773 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	TRAM2	Q15035	370 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SLC36A3	Q495N2	470 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	CLEC12A	Q5QGZ9	265 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SYT14	Q8NB59	555 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	GEMIN6	Q8WXD5	167 aa	Known RBP	7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	C11orf40	Q8WZ69	217 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	LRRC58	Q96CX6	371 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	SPNS1	Q9H2V7	528 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544	PLEK2	Q9NYT0	353 aa		7.77	□□□□□ -1.17
HCG18-238	ENST00000449544		A0A087WZY1	265 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	TMED7-TICAM2	A0A0A6YYA0	188 aa		7.76	□□□□□ -1.17
HCG18-238	ENST00000449544	ENO4	A6NNW6	628 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms