RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PDZK1Q5T2W1 519 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 TNFAIP8L2Q6P589 184 aaPredicted RBP12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 FRRS1Q6ZNA5 592 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 RNF130Q86XS8 419 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 GRAMD2AQ8IUY3 354 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 GCNT2Q8N0V5 402 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 OIT3Q8WWZ8 545 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 ROPN1LQ96C74 230 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 MARK4Q96L34 752 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 PANX1Q96RD7 426 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 PINK1Q9BXM7 581 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 POLE3Q9NRF9 147 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 EXD2Q9NVH0 621 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 F8P00451 2351 aa12.64□□□□□ -0.39
RTFDC1-204ENST00000449062 ROS1P08922 2347 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 H3BNH8 94 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 GTPBP1O00178 669 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 SEC14L5O43304 696 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 KIAA0513O60268 411 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 DIAPH2O60879 1101 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 BCAS1O75363 584 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 OPN1LWP04000 364 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 PRKCAP17252 672 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 CAPN3P20807 821 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 SHC1P29353 583 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 UQCRC1P31930 480 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 EIF1P41567 113 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 SLC6A8P48029 635 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 PCYT1AP49585 367 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 CHRNEQ04844 493 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 SKP2Q13309 424 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 DAZAP2Q15038 168 aaPredicted RBP12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 COX20Q5RI15 118 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF621Q6ZSS3 439 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 BTLAQ7Z6A9 289 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 LURAP1LQ8IV03 231 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 FUNDC1Q8IVP5 155 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 FAM71CQ8NEG0 241 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 OR9I1Q8NGQ6 314 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 LRRC8CQ8TDW0 803 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 ZFP90Q8TF47 636 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 CKAP2Q8WWK9 683 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 EBF4Q9BQW3 602 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 PIGMQ9H3S5 423 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 CRIM1Q9NZV1 1036 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF264O43296 627 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 CTAG2O75638 210 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 CD1EP15812 388 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 HOXB9P17482 250 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 PGM1P36871 562 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 PEX19P40855 299 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 MAGEA8P43361 318 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 KIR2DL3P43628 341 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF41P51814 821 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 POLR2JP52435 117 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 PPP2R2AP63151 447 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 TXNL4AP83876 142 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 PON3Q15166 354 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 SYPL1Q16563 259 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 VWA1Q6PCB0 445 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 MSANTD1Q6ZTZ1 278 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ESPNLQ6ZVH7 1005 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 CHMP1BQ7LBR1 199 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 C16orf62Q7Z3J2 963 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ANKFN1Q8N957 763 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 OR10D3Q8NH80 312 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 OSTF1Q92882 214 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 VPS33AQ96AX1 596 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 TRNT1Q96Q11 434 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ZBTB18Q99592 522 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 CCDC28BQ9BUN5 200 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 TCF7L2Q9NQB0 619 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 STOML1Q9UBI4 398 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 LIPT1Q9Y234 373 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 ITPR3Q14573 2671 aa12.62□□□□□ -0.39
RTFDC1-204ENST00000449062 FAM234BA2RU67 622 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 RFXANKO14593 260 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 MSTNO14793 375 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 CXCL13O43927 109 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ADAM11O75078 769 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 H6PDO95479 791 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms