RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TBC1D23Q9NUY8 699 aa16.31■□□□□ 0.2
LMNA-208ENST00000448611 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.31■□□□□ 0.2
LMNA-208ENST00000448611 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
LMNA-208ENST00000448611 M0R082 166 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 AGRPO00253 132 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 PTHP01270 115 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 DBTP11182 482 aaKnown RBP16.3■□□□□ 0.2
LMNA-208ENST00000448611 MAKP20794 623 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 NR4A1P22736 598 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 OCA2Q04671 838 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 PWWP2BQ6NUJ5 590 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 C9orf40Q8IXQ3 194 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 C9orf43Q8TAL5 461 aaPredicted RBP16.3■□□□□ 0.2
LMNA-208ENST00000448611 RNF217Q8TC41 542 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 ZNF582Q96NG8 517 aaPredicted RBP16.3■□□□□ 0.2
LMNA-208ENST00000448611 DPH1Q9BZG8 443 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 ATP13A2Q9NQ11 1180 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 TAS2R16Q9NYV7 291 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 RARRES3Q9UL19 164 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 R4GN57 208 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 SEC16AO15027 2179 aa16.3■□□□□ 0.2
LMNA-208ENST00000448611 UNC119BA6NIH7 251 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 CSTAP01040 98 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 IFI30P13284 250 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 CTBP2P56545 445 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 FXYD6P3P58550 94 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 EBPQ15125 230 aaKnown RBP16.29■□□□□ 0.2
LMNA-208ENST00000448611 LPAL2Q16609 132 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 NDUFAF6Q330K2 333 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 FNDC7Q5VTL7 733 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SLC30A6Q6NXT4 461 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 TMPRSS11FQ6ZWK6 438 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 P2RY8Q86VZ1 359 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 WDR36Q8NI36 951 aaKnown RBP16.29■□□□□ 0.2
LMNA-208ENST00000448611 STT3BQ8TCJ2 826 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 BRIX1Q8TDN6 353 aaKnown RBP16.29■□□□□ 0.2
LMNA-208ENST00000448611 OIT3Q8WWZ8 545 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 CRELD1Q96HD1 420 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 ART5Q96L15 291 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SLC38A2Q96QD8 506 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 PHOX2BQ99453 314 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 HOXD1Q9GZZ0 328 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SLC24A3Q9HC58 644 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 MEPEQ9NQ76 525 aaPredicted RBP16.29■□□□□ 0.2
LMNA-208ENST00000448611 UBQLN4Q9NRR5 601 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 MED31Q9Y3C7 131 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 EFCAB7A8K855 629 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SCRG1O75711 98 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 ZGLP1P0C6A0 271 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 ZNF182P17025 639 aaPredicted RBP16.29■□□□□ 0.2
LMNA-208ENST00000448611 LIPAP38571 399 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 ADH7P40394 386 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 DCAF7P61962 342 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 DAB2P98082 770 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SPCS2Q15005 226 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 TIGD6Q17RP2 521 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 NKAIN1Q4KMZ8 207 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 LINC00114Q6XXX2 140 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SHISA6Q6ZSJ9 500 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 LANCL3Q6ZV70 420 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SLITRK4Q8IW52 837 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 FAM71CQ8NEG0 241 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 BPIFA2Q96DR5 249 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 PRRG3Q9BZD7 231 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 TMEM5Q9Y2B1 443 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 SLC35A3Q9Y2D2 325 aa16.29■□□□□ 0.2
LMNA-208ENST00000448611 KPNA4O00629 521 aaPredicted RBP16.28■□□□□ 0.2
LMNA-208ENST00000448611 RFPL3O75679 317 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 FUT1P19526 365 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 RBM34P42696 430 aaKnown RBP16.28■□□□□ 0.2
LMNA-208ENST00000448611 FOXL2P58012 376 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 NCF4Q15080 339 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 CLPPQ16740 277 aaPredicted RBP16.28■□□□□ 0.2
LMNA-208ENST00000448611 PGGHGQ32M88 737 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 ALG10BQ5I7T1 473 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 KIRREL2Q6UWL6 708 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 OR1N1Q8NGS0 311 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 SAMD8Q96LT4 415 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 GAL3ST4Q96RP7 486 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 TIMMDC1Q9NPL8 285 aa16.28■□□□□ 0.2
LMNA-208ENST00000448611 SYNDIG1LA6NDD5 238 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 SURF4O15260 269 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
LMNA-208ENST00000448611 SYPP08247 313 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 CD36P16671 472 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 TBXA2RP21731 343 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 ZNF385CQ66K41 422 aaPredicted RBP16.27■□□□□ 0.2
LMNA-208ENST00000448611 ULK3Q6PHR2 472 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 CACTIN-AS1Q8N1I8 211 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 OR2T33Q8NG76 320 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 TMEM80Q96HE8 168 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 GFM1Q96RP9 751 aaKnown RBP16.27■□□□□ 0.2
LMNA-208ENST00000448611 GTPBP2Q9BX10 602 aaKnown RBP16.27■□□□□ 0.2
LMNA-208ENST00000448611 OR52D1Q9H346 318 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 HHATLQ9HCP6 504 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 IL20RAQ9UHF4 553 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 GPR52Q9Y2T5 361 aa16.27■□□□□ 0.2
LMNA-208ENST00000448611 KDM4EB2RXH2 506 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms