RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 EEF1E1O43324 174 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 EIF4E2O60573 245 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 TNFSF13O75888 250 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 UBL4AP11441 157 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 EIF1P41567 113 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 AQP5P55064 265 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 SUMO3P55854 103 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 RPS3AP61247 264 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 CHRNEQ04844 493 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 PON3Q15166 354 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 SYPL1Q16563 259 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 CTU2Q2VPK5 515 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 GPAT3Q53EU6 434 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 OR2A2Q6IF42 318 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 FRRS1Q6ZNA5 592 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 LILRA2Q8N149 483 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF619Q8N2I2 560 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ANKFN1Q8N957 763 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 OR5W2Q8NH69 310 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 FBXO27Q8NI29 283 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 FNDC9Q8TBE3 224 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 PNPT1Q8TCS8 783 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ZFP90Q8TF47 636 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ARSGQ96EG1 525 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 LRRC46Q96FV0 321 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF559Q9BR84 538 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 THUMPD3Q9BV44 507 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 LAT2Q9GZY6 243 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 TMEM185BQ9H7F4 350 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 RMND5AQ9H871 391 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 MCCC2Q9HCC0 563 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 POLE3Q9NRF9 147 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 FOXD3Q9UJU5 478 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF175Q9Y473 711 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 MAST4O15021 2626 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 KIAA0513O60268 411 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 DNAJA2O60884 412 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 CYP7B1O75881 506 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 AQP8O94778 261 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 H6PDO95479 791 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 NTN1O95631 604 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 KRT75O95678 551 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 CSTAP01040 98 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 CRHP06850 196 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 ZCCHC18P0CG32 403 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 PRKCAP17252 672 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 ADH6P28332 368 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 SHC1P29353 583 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 KIR2DL3P43628 341 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 MRPL19P49406 292 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 CCR4P51679 360 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 MVDP53602 400 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 EEF1A1P68104 462 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 FOXF1Q12946 379 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 MYBPHQ13203 477 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 SKP2Q13309 424 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 FGFBP1Q14512 234 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 GTDC1Q4AE62 458 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 TIGD2Q4W5G0 525 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 EEF1A1P5Q5VTE0 462 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 MSANTD1Q6ZTZ1 278 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 EIF3MQ7L2H7 374 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 BTLAQ7Z6A9 289 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 HMGN2P46Q86SG4 172 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 FUNDC1Q8IVP5 155 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 TMCO5AQ8N6Q1 288 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 TOR1AIP2Q8NFQ8 470 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 OR10D3Q8NH80 312 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 STARD4Q96DR4 205 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 ITCHQ96J02 903 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 ADGRG7Q96K78 797 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 TRNT1Q96Q11 434 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 QRSL1Q9H0R6 528 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 PIGMQ9H3S5 423 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 RNF122Q9H9V4 155 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 CRIM1Q9NZV1 1036 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 PACSIN3Q9UKS6 424 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 LIPT1Q9Y234 373 aa11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 GPC6Q9Y625 555 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-203ENST00000448428 FBN2P35556 2912 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 A8MXE2 369 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 TNFSF11O14788 317 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 CXCL13O43927 109 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 BCAS1O75363 584 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 ANP32DO95626 131 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 CHRM4P08173 479 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 UBTFL6P0CB48 400 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 ME2P23368 584 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 SFTPDP35247 375 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 PGM1P36871 562 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 PEX19P40855 299 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC6A8P48029 635 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms