RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RPA2P15927 270 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 PRKAR1BP31321 381 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 GRK4P32298 578 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 KRT33BQ14525 404 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TRAM2Q15035 370 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 FAM122BQ7Z309 247 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 MRGPREQ86SM8 312 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 KLHL9Q9P2J3 617 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 EP400Q96L91 3159 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 FAM183AA6NL82 134 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 RAD1O60671 282 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 EPXP11678 715 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 MAT2AP31153 395 aaKnown RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 MAPK14Q16539 360 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 ZDHHC20Q5W0Z9 365 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 ZCCHC12Q6PEW1 402 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 HMGN2P46Q86SG4 172 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 C16orf78Q8WTQ4 265 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 SCLYQ96I15 445 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 A4GALTQ9NPC4 353 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 MAN2C1Q9NTJ4 1040 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 DCAF16Q9NXF7 216 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TAS2R10Q9NYW0 307 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 RBPJLQ9UBG7 517 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 ZNF629Q9UEG4 869 aaPredicted RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 CHD5Q8TDI0 1954 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 GLTPD2A6NH11 291 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 E9PI62 339 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 HYAL3O43820 417 aaPredicted RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 SC5DO75845 299 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 IGHV2-70P01814 119 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 RLN1P04808 185 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 GNSP15586 552 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 IFNGR2P38484 337 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 SPAM1P38567 509 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 CRYBB1P53674 252 aaPredicted RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 CDH4P55283 916 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 RHOAP61586 193 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 PRR5P85299 388 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TRAM1Q15629 374 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 CPOQ8IVL8 374 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 CMTM4Q8IZR5 234 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 SLC44A3Q8N4M1 653 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 OR1S2Q8NGQ3 325 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TNFAIP8L1Q8WVP5 186 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 FCAMRQ8WWV6 532 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 TMEM185BQ9H7F4 350 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 CACYBPQ9HB71 228 aaKnown RBP8.78□□□□□ -1
SYNPO2-204ENST00000448416 IL20RAQ9UHF4 553 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 MAFFQ9ULX9 164 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 KIAA1671Q9BY89 1806 aa8.78□□□□□ -1
SYNPO2-204ENST00000448416 A0A087WUU8 490 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 LRIT2A6NDA9 550 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 GABARAPH6UMI1 98 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 ZNF197O14709 1029 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 SURF4O15260 269 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 FLRT2O43155 660 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 SLC2A10O95528 541 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 F12P00748 615 aaPredicted RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 SELLP14151 372 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 FPR3P25089 353 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 ARFIP1P53367 373 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 CNTN1Q12860 1018 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 ZNF177Q13360 481 aaPredicted RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 ZNF546Q86UE3 836 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 OR2AK2Q8NG84 335 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 OR10H4Q8NGA5 316 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 LGALS14Q8TCE9 139 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 SMAP2Q8WU79 429 aaPredicted RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 VOPP1Q96AW1 172 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 FAM46AQ96IP4 442 aaKnown RBP8.77□□□□□ -1
SYNPO2-204ENST00000448416 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 PCDHB10Q9UN67 800 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 NOD1Q9Y239 953 aa8.77□□□□□ -1
SYNPO2-204ENST00000448416 HELZP42694 1942 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TXNL1O43396 289 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TGFB1P01137 390 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 LUMP51884 338 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 RNF219Q5W0B1 726 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF772Q68DY9 489 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TSSK4Q6SA08 328 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 OR6T1Q8NGN1 323 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 OR4Q3Q8NH05 313 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 BRIX1Q8TDN6 353 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TDP1Q9NUW8 608 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ASF1BQ9NVP2 202 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 GHRLQ9UBU3 117 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 MKL2Q9ULH7 1088 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 AK6Q9Y3D8 172 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 KANTRA0A1W2PQU2 76 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PYCARD-AS1I3L0S3 204 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 NDUFB6O95139 128 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms