RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 KLHL21Q9UJP4 597 aa12□□□□□ -0.49
SHC1-210ENST00000448116 ZNF222Q9UK12 451 aa12□□□□□ -0.49
SHC1-210ENST00000448116 POLHQ9Y253 713 aa12□□□□□ -0.49
SHC1-210ENST00000448116 TRAV27A0A087WT01 109 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3DA0A087WVF3 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3IA0A087WXS9 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3EA0A087X179 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3KA0A087X1G2 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3FA6NER0 549 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3LB9A6J9 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 SLC19A2O60779 497 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 IGHA1P01876 353 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3HP0C7X1 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MYOGP15173 224 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 SRP54P61011 504 aaKnown RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 ERVK-21P61565 698 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 PRAMEF8Q5VWM4 474 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 PRAMEF7Q5VXH5 474 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3GQ6DHY5 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3CQ6IPX1 549 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 RANBP3LQ86VV4 465 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D3Q8IZP1 549 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 OR10G6Q8NH81 332 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 NR4A3Q92570 626 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 ASB16Q96NS5 453 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 CERS4Q9HA82 394 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 DPP7Q9UHL4 492 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 FBXL4Q9UKA2 621 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MDC1Q14676 2089 aaKnown RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 KIAA1549LQ6ZVL6 1849 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 PRR23D1E9PI22 279 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 ERVH48-1M5A8F1 160 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 PEX12O00623 359 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 GNB5O14775 395 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 LDB3O75112 727 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 PRR23D2P0DMB1 279 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 RGS1Q08116 209 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 ZC3H14Q6PJT7 736 aaKnown RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 WDR88Q6ZMY6 472 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 GPR135Q8IZ08 494 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 LSMEM1Q8N8F7 131 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MFSD9Q8NBP5 474 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 OR13C5Q8NGS8 318 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 SLC22A8Q8TCC7 542 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 AKAP1Q92667 903 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■□□□ 13
SHC1-210ENST00000448116 HS6ST2Q96MM7 605 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MS4A4EQ96PG1 132 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 C1QTNF2Q9BXJ5 285 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 C11orf49Q9H6J7 331 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TRIM36Q9NQ86 728 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 THAP10Q9P2Z0 257 aaPredicted RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 A0A1W2PRG6 482 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 SLC43A1O75387 559 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 NT5EP21589 574 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 PYCR1P32322 319 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 GJA4P35212 333 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 HCCSP53701 268 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 ATP12AP54707 1039 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
SHC1-210ENST00000448116 NIPAL3Q6P499 406 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 AMIGO1Q86WK6 493 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 CDK20Q8IZL9 346 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 OR51L1Q8NGJ5 315 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TMEM239Q8WW34 195 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 SDF2Q99470 211 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MARVELD1Q9BSK0 173 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 ANKRD19PQ9H560 264 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 MED17Q9NVC6 651 aa11.99□□□□□ -0.49
SHC1-210ENST00000448116 TRAPPC13A5PLN9 417 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 FAM86C2PA6NEL3 165 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 EML2O95834 649 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 OR12D2P58182 307 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 ZNF600Q6ZNG1 722 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 VN1R4Q7Z5H5 301 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 ASPGQ86U10 573 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 GID4Q8IVV7 300 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 C4orf36Q96KX1 117 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 MED28Q9H204 178 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 BEX1Q9HBH7 125 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 NUDT15Q9NV35 164 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 NCKAP1Q9Y2A7 1128 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 CA5BQ9Y2D0 317 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 FAM25EA8MYX2 175 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 C1QBP02746 253 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 CD3GP09693 182 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 ACSL1P33121 698 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 FZD5Q13467 585 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 FCN2Q15485 313 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 SLC25A35Q3KQZ1 300 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 CDONQ4KMG0 1287 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 COX18Q8N8Q8 333 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 NDC1Q9BTX1 674 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms