RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 BCDIN3DQ7Z5W3 292 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC22A15Q8IZD6 547 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 OR8J2Q8NGG1 315 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC38A5Q8WUX1 472 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 NIPSNAP1Q9BPW8 284 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 SLC25A37Q9NYZ2 338 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 H7BY64 318 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CYTIPO60759 359 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PRKCZQ05513 592 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 GFOD2Q3B7J2 385 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PRAP1Q96NZ9 151 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 OR2M4Q96R27 311 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 FZD1Q9UP38 647 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 FABP5Q01469 135 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 KIAA0141Q14154 515 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 OTOP2Q7RTS6 562 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ASB13Q8WXK3 278 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 THRSPQ92748 146 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 PGGHGQ32M88 737 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 CALHM3Q86XJ0 350 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 TAAR8Q969N4 342 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 IER3IP1Q9Y5U9 82 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 ZNF705FA8MVS1 300 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 ZNF705DP0CH99 300 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 ZNF705BP0CI00 300 aaPredicted RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 CPT2P23786 658 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 RBMS2Q15434 407 aaKnown RBP7.41□□□□□ -1.22
SMG1-202ENST00000446231 F2RL3Q96RI0 385 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 LAMA4Q16363 1823 aa7.41□□□□□ -1.22
SMG1-202ENST00000446231 A0A0B4J203 849 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SLC22A23A1A5C7 686 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 POP7O75817 140 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 HLA-AP01891 365 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 IGFALSP35858 605 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 PLEKHS1Q5SXH7 462 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR52E2Q8NGJ4 325 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 WDFY2Q96P53 400 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SEMA4CQ9C0C4 833 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SETD1AO15047 1707 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 A0A087WZY1 265 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 MFSD2BA6NFX1 497 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 ACRV1P26436 265 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 FAM209BQ5JX69 171 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 FCRLBQ6BAA4 426 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SLC18B1Q6NT16 456 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 FAM71CQ8NEG0 241 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 REV1Q9UBZ9 1251 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SCN9AQ15858 1988 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 ATP1B1P05026 303 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SHC1P29353 583 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 MEF2AQ02078 507 aaPredicted RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 MANEALQ5VSG8 457 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SHEQ5VZ18 495 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 C2CD4CQ8TF44 421 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 NPAS1Q99742 590 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 ACTRT3Q9BYD9 372 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 V9GY05 133 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR2F2O95006 317 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 BMP8BP34820 402 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR2F1Q13607 317 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 BMP8AQ7Z5Y6 402 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR4K13Q8NH42 304 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 MRI1Q9BV20 369 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 PLAC1Q9HBJ0 212 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 TP53BP1Q12888 1972 aaPredicted RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 C2orf78A6NCI8 922 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR5H14A6NHG9 310 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 EIF4EP06730 217 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 C1GALT1C1LP0DN25 315 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 RPL19P84098 196 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 RPL22L1Q6P5R6 122 aaKnown RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 ARHGAP12Q8IWW6 846 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 FAM26EQ8N5C1 309 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR5H2Q8NGV7 314 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 TMEFF2Q9UIK5 374 aaPredicted RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 PDHXO00330 501 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 P2RX6O15547 441 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 RGS11O94810 467 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 GLULP15104 373 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 H3F3CQ6NXT2 135 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 ZMYND19Q96E35 227 aaPredicted RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 GJD4Q96KN9 370 aaPredicted RBP7.4□□□□□ -1.22
SMG1-202ENST00000446231 CYSLTR2Q9NS75 346 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 LPLP06858 475 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 YAF2Q8IY57 180 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 LRRC72A6NJI9 287 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 SYT5O00445 386 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 RAB4AP20338 218 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 UBTD2Q8WUN7 234 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 GPR137Q96N19 417 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 OR5B12Q96R08 314 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 ADAP2Q9NPF8 381 aa7.4□□□□□ -1.22
SMG1-202ENST00000446231 CRHR2Q13324 411 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 PRRC1Q96M27 445 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 LRIT2A6NDA9 550 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 ZNF623O75123 536 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms