RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 EGFP01133 1207 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 CLDN12P56749 244 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 C2orf68Q2NKX9 166 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 HES5Q5TA89 166 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 ZNF620Q6ZNG0 422 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 PDZD9Q8IXQ8 264 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 CMIPQ8IY22 773 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 CMTM4Q8IZR5 234 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 CMTM8Q8IZV2 173 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 PELOQ9BRX2 385 aaKnown RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 NDC1Q9BTX1 674 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 SEMA4CQ9C0C4 833 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 PCDHGA5Q9Y5G8 931 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 A0A1W2PS29 197 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 D6RAR5 112 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 J3QRE1 110 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 HMGN2P05204 90 aaKnown RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 C8orf89P0DMQ9 161 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 EPXP11678 715 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 NCBP2P52298 156 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■□□□ 13
VPS52-212ENST00000445902 GK2Q14410 553 aaPredicted RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 FAM26DQ5JW98 314 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 NIPAL3Q6P499 406 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 HDDC3Q8N4P3 179 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 RGMAQ96B86 450 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 UQCC2Q9BRT2 126 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 IFT22Q9H7X7 185 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 SLC6A20Q9NP91 592 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 IL20Q9NYY1 176 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
VPS52-212ENST00000445902 TCF20Q9UGU0 1960 aaKnown RBP12.98□□□□□ -0.33
VPS52-212ENST00000445902 DENND4AQ7Z401 1863 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 CDHR4A6H8M9 788 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 SELENOFO60613 162 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GALR3O60755 368 aaPredicted RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 FMO6PO60774 539 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 B3GALNT1O75752 331 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 WDPCPO95876 746 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 MT-ND5P03915 603 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 RLN2P04090 185 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GABRA1P14867 456 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GALP22466 123 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 CLDN2P57739 230 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 HEPHL1Q6MZM0 1159 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GSG1LQ6UXU4 331 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 AHCYL2Q96HN2 611 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 TRMT61BQ9BVS5 477 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 CAMK2AQ9UQM7 478 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 SCN3AQ9NY46 2000 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 A0A1B0GUH1 482 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 BSGP35613 385 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 EPHA4P54764 986 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GNA13Q14344 377 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 KHDRBS2Q5VWX1 349 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 ELP2Q6IA86 826 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 GLDNQ6ZMI3 551 aaPredicted RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 SSX6Q7RTT6 188 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 DIO2Q92813 273 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 SGPP1Q9BX95 441 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 DPH1Q9BZG8 443 aa12.97□□□□□ -0.33
VPS52-212ENST00000445902 ZCCHC2Q9C0B9 1178 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 EXOSC3Q9NQT5 275 aaKnown RBP12.97□□□□□ -0.33
VPS52-212ENST00000445902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 CREBL2O60519 120 aaPredicted RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 GREM1O60565 184 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 OR5F1O95221 314 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 THY1P04216 161 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 ZGLP1P0C6A0 271 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 NDUFV2P19404 249 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 NOS3P29474 1203 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 DCTDP32321 178 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 ST3GAL3Q11203 375 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 TP53I3Q53FA7 332 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 MEPCEQ7L2J0 689 aaKnown RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 OR9A1PQ8NGU1 263 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 MACROD1Q9BQ69 325 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 C7orf50Q9BRJ6 194 aaKnown RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 SLC25A18Q9H1K4 315 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 MED9Q9NWA0 146 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
VPS52-212ENST00000445902 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
VPS52-212ENST00000445902 FLRT2O43155 660 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms