RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DYDC1Q8WWB3 177 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ROPN1LQ96C74 230 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ZG16BQ96DA0 208 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 STARD4Q96DR4 205 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ADGRG7Q96K78 797 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ZNF350Q9GZX5 532 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 SLC6A13Q9NSD5 602 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ZIM2Q9NZV7 527 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 FOXD3Q9UJU5 478 aaPredicted RBP13.26□□□□□ -0.29
USE1-202ENST00000445667 ZNF175Q9Y473 711 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 WDR45Q9Y484 360 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 ABCA12Q86UK0 2595 aa13.26□□□□□ -0.29
USE1-202ENST00000445667 PDZD2O15018 2839 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 HMGB1P1B2RPK0 211 aaPredicted RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 RFXANKO14593 260 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 TNFSF11O14788 317 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 ZNF264O43296 627 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 CXCL13O43927 109 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 EIF4E2O60573 245 aaKnown RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 SMNDC1O75940 238 aaKnown RBP eCLIP13.25□□□□□ -0.29
USE1-202ENST00000445667 AGR2O95994 175 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 IL6P05231 212 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 UBL4AP11441 157 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 SHC1P29353 583 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 SFTPDP35247 375 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 KIR2DL2P43627 348 aaPredicted RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 SLC6A8P48029 635 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 CPA2P48052 419 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 IDH3AP50213 366 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 CCR4P51679 360 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 PPP2R2AP63151 447 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 SIRPAP78324 504 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 SYPL1Q16563 259 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 GPAT3Q53EU6 434 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 COX20Q5RI15 118 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 OR2A2Q6IF42 318 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 DNAJC14Q6Y2X3 702 aaPredicted RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 BTLAQ7Z6A9 289 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 LILRA2Q8N149 483 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 TRIML2Q8N7C3 387 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 ANKFN1Q8N957 763 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 OR5W2Q8NH69 310 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 EBF4Q9BQW3 602 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 PRRG4Q9BZD6 226 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 PIGMQ9H3S5 423 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 VIPAS39Q9H9C1 493 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 RNF122Q9H9V4 155 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 SDR39U1Q9NRG7 319 aaPredicted RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 INTS9Q9NV88 658 aaKnown RBP13.25□□□□□ -0.29
USE1-202ENST00000445667 GALNT8Q9NY28 637 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 PACSIN3Q9UKS6 424 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 MED12LQ86YW9 2145 aa13.25□□□□□ -0.29
USE1-202ENST00000445667 TUBAL3A6NHL2 446 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 A8MXE2 369 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 ADAMDEC1O15204 470 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 KIAA0513O60268 411 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 BCAS1O75363 584 aaPredicted RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 SASH3O75995 380 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 H6PDO95479 791 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 CSTAP01040 98 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 CRHP06850 196 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 UBTFL6P0CB48 400 aaPredicted RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 CAPN3P20807 821 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 ME2P23368 584 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 PEX19P40855 299 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 EIF1P41567 113 aaKnown RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 POLR2JP52435 117 aaKnown RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 SUMO3P55854 103 aaPredicted RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 EEF1A1P68104 462 aaKnown RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 CHRNEQ04844 493 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 LRRC74AQ0VAA2 488 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 SKP2Q13309 424 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 QPRTQ15274 297 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 EEF1A1P5Q5VTE0 462 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 HBMQ6B0K9 141 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 ESPNLQ6ZVH7 1005 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 KIF18BQ86Y91 864 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 ZNF619Q8N2I2 560 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 MIER2Q8N344 545 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 ATP6V1C2Q8NEY4 427 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 OR2V1Q8NHB1 315 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 OSTF1Q92882 214 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 LAT2Q9GZY6 243 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 SAP130Q9H0E3 1048 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 QRSL1Q9H0R6 528 aaKnown RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 OPN3Q9H1Y3 402 aaPredicted RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 TCF7L2Q9NQB0 619 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 CLEC4AQ9UMR7 237 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
USE1-202ENST00000445667 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
USE1-202ENST00000445667 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
USE1-202ENST00000445667 TGDSO95455 350 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 ANP32DO95626 131 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 PRKCAP17252 672 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 ADH6P28332 368 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms