RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FGFBP1Q14512 234 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 TBCELQ5QJ74 424 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 PGM2L1Q6PCE3 622 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 DHFR2Q86XF0 187 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 CNOT9Q92600 299 aaKnown RBP15.69■□□□□ 0.1
LIME1-202ENST00000444951 ZNF597Q96LX8 424 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 NSMCE2Q96MF7 247 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 MED11Q9P086 117 aa15.69■□□□□ 0.1
LIME1-202ENST00000444951 ANKRD33BA6NCL7 494 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 FRS3O43559 492 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 SNX4O95219 450 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 THBS1P07996 1170 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 ATP6V1B2P21281 511 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 TCEA1P23193 301 aaKnown RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 ERFP50548 548 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 EEF1A1P68104 462 aaKnown RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 ZNF117Q03924 483 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 C17orf67Q0P5P2 114 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 FNDC7Q5VTL7 733 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 AP1ARQ63HQ0 302 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 TMEM81Q6P7N7 255 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 MAMDC2Q7Z304 686 aaPredicted RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 OR4K17Q8NGC6 315 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 OR1J4Q8NGS1 313 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 RNF138Q8WVD3 245 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 LRGUKQ96M69 825 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 GNRHR2Q96P88 292 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 PINK1Q9BXM7 581 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 RSPO3Q9BXY4 272 aaPredicted RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 DSN1Q9H410 356 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 ARMC7Q9H6L4 198 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 ADPRHL2Q9NX46 363 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 SLC7A8Q9UHI5 535 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 BOKQ9UMX3 212 aaPredicted RBP15.68■□□□□ 0.1
LIME1-202ENST00000444951 SLC35A3Q9Y2D2 325 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 MYO9AB2RTY4 2548 aa15.68■□□□□ 0.1
LIME1-202ENST00000444951 CSMD1Q96PZ7 3565 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 FAM166BA8MTA8 275 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 ADAM10O14672 748 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 ZNF264O43296 627 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 CDC40O60508 579 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIME1-202ENST00000444951 TRIM3O75382 744 aaPredicted RBP15.67■□□□□ 0.1
LIME1-202ENST00000444951 CIB2O75838 187 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 NUDT14O95848 222 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 GKN3PP0CG01 181 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 TNFRSF1BP20333 461 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 CD247P20963 164 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 PRKAR1BP31321 381 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 RYKP34925 604 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 FLOT2Q14254 428 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 TOMM20Q15388 145 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 DUSP7Q16829 419 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 EIPR1Q53HC9 387 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 DHRS4L2Q6PKH6 230 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 CBLN3Q6UW01 205 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 COMTD1Q86VU5 262 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 PLCZ1Q86YW0 608 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 WDSUB1Q8N9V3 476 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 FAM98AQ8NCA5 519 aaKnown RBP15.67■□□□□ 0.1
LIME1-202ENST00000444951 GPR32P1Q8NGA4 272 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 B4GALNT2Q8NHY0 566 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 VANGL1Q8TAA9 524 aaPredicted RBP15.67■□□□□ 0.1
LIME1-202ENST00000444951 UTP4Q969X6 686 aaKnown RBP15.67■□□□□ 0.1
LIME1-202ENST00000444951 ASB9Q96DX5 294 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 TMEM41AQ96HV5 264 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 MMADHCQ9H3L0 296 aaPredicted RBP15.67■□□□□ 0.1
LIME1-202ENST00000444951 ACTR3BQ9P1U1 418 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 POMPQ9Y244 141 aa15.67■□□□□ 0.1
LIME1-202ENST00000444951 CDHR4A6H8M9 788 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 LRRC3CA6NJW4 275 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 SNPHO15079 494 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 RASAL1O95294 804 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 KCNJ5P48544 419 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 HOXC5Q00444 222 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 PLAURQ03405 335 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 SKP2Q13309 424 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 FXNQ16595 210 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 RNF220Q5VTB9 566 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 TIGD3Q6B0B8 471 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 FKBP9P1Q75LS8 142 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 VTCN1Q7Z7D3 282 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 MISPQ8IVT2 679 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 CMIPQ8IY22 773 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 BHLHE22Q8NFJ8 381 aaPredicted RBP15.66■□□□□ 0.1
LIME1-202ENST00000444951 RASSF5Q8WWW0 418 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 OIT3Q8WWZ8 545 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 LZICQ8WZA0 190 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 PROX1Q92786 737 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 HSH2DQ96JZ2 352 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 KLHDC3Q9BQ90 382 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 MUC13Q9H3R2 512 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 GORASP2Q9H8Y8 452 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 ZFP64Q9NPA5 681 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 KLHL28Q9NXS3 571 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 DNAJB12Q9NXW2 375 aaKnown RBP15.66■□□□□ 0.1
LIME1-202ENST00000444951 RPS6KA6Q9UK32 745 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 FBXL2Q9UKC9 423 aa15.66■□□□□ 0.1
LIME1-202ENST00000444951 BAG5Q9UL15 447 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms