RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 PABPC4LP0CB38 370 aaKnown RBP12.79□□□□□ -0.36
SSBP3-208ENST00000444533 PEPDP12955 493 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 RPS4Y1P22090 263 aaKnown RBP12.79□□□□□ -0.36
SSBP3-208ENST00000444533 AQP1P29972 269 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 PCGF2P35227 344 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 CA7P43166 264 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 NCALDP61601 193 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 MAPK14Q16539 360 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 VMACQ2NL98 169 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 GXYLT1Q4G148 440 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 NHSL2Q5HYW2 709 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 MRPL2Q5T653 305 aaKnown RBP12.79□□□□□ -0.36
SSBP3-208ENST00000444533 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 ZNF585AQ6P3V2 769 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 Q6ZPB1 254 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-208ENST00000444533 ZNF550Q7Z398 422 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
SSBP3-208ENST00000444533 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 MEIOBQ8N635 442 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 OR2T12Q8NG77 320 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 OR5M9Q8NGP3 310 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 TRIM8Q9BZR9 551 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 EVA1AQ9H8M9 152 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 SPAG4Q9NPE6 437 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 SERINC1Q9NRX5 453 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 MED17Q9NVC6 651 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 ADA2Q9NZK5 511 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 ICAM5Q9UMF0 924 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 ZNF835Q9Y2P0 537 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 SHANK1Q9Y566 2161 aa12.79□□□□□ -0.36
SSBP3-208ENST00000444533 CFAP73A6NFT4 308 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 GJE1A6NN92 205 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 AHRRA9YTQ3 701 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 FAM220BPB1ANY3 271 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 H0Y3Z8 333 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 H3BML4 177 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 FXYD1O00168 92 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 CCL21O00585 134 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ZIC3O60481 467 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 AGFG2O95081 481 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 GP1BBP13224 206 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 BMP7P18075 431 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ADH6P28332 368 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 PRKAR1BP31321 381 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 RYKP34925 604 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 PGM1P36871 562 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 CPA2P48052 419 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 RPS3AP61247 264 aaKnown RBP12.78□□□□□ -0.36
SSBP3-208ENST00000444533 PSME3P61289 254 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 SKP2Q13309 424 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 SELPLGQ14242 412 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 NDUFAF6Q330K2 333 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 VASNQ6EMK4 673 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 CBLN3Q6UW01 205 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ARSKQ6UWY0 536 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 VRK2Q86Y07 508 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ST8SIA1Q92185 356 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 ARSGQ96EG1 525 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 MRGPRX4Q96LA9 322 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 TIMP4Q99727 224 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 UGT2B28Q9BY64 529 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 KCNE5Q9UJ90 142 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 TINAGQ9UJW2 476 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 SPIN1Q9Y657 262 aaPredicted RBP12.78□□□□□ -0.36
SSBP3-208ENST00000444533 AP4B1Q9Y6B7 739 aa12.78□□□□□ -0.36
SSBP3-208ENST00000444533 CENPVL1A0A0U1RR11 272 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 ELOVL7A1L3X0 281 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 OR2M5A3KFT3 312 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 C7orf72A4D263 438 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 CDHR4A6H8M9 788 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 C17orf51A8MQB3 221 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 LRRTM2O43300 516 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 CALB2P22676 271 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 ACVR2AP27037 513 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 ELK4P28324 431 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 HTR3AP46098 478 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 SLC7A2P52569 658 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 GFRA1P56159 465 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 SRYQ05066 204 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 CRYZQ08257 329 aaKnown RBP12.77□□□□□ -0.37
SSBP3-208ENST00000444533 VEZF1Q14119 521 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 QPRTQ15274 297 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 ADRM1Q16186 407 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 BCL2A1Q16548 175 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 C3AR1Q16581 482 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 PLPPR5Q32ZL2 321 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 ZNF836Q6ZNA1 936 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 FJX1Q86VR8 437 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 PTOV1Q86YD1 416 aa12.77□□□□□ -0.37
SSBP3-208ENST00000444533 GRAMD2AQ8IUY3 354 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms