RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GRHL2Q6ISB3 625 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 FAM83HQ6ZRV2 1179 aaPredicted RBP4.7□□□□□ -1.66
HERC1-201ENST00000443617 ZNF683Q8IZ20 524 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 BBS1Q8NFJ9 593 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 UBQLN3Q9H347 655 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 POFUT1Q9H488 388 aa4.7□□□□□ -1.66
HERC1-201ENST00000443617 HPP00738 406 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MMP3P08254 477 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 P2RX1P51575 399 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TMPRSS11BQ86T26 416 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 LDLRAD3Q86YD5 345 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 LINC00597Q9H2U6 94 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ANKRD19PQ9H560 264 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 LOC100509620A0A075B734 347 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TRAV1-2A0A0B4J238 106 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SDHAP31040 664 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 IRS1P35568 1242 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GCGRP47871 477 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CCR8P51685 355 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TGM3Q08188 693 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 C9orf152Q5JTZ5 239 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 H3F3CQ6NXT2 135 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 NHLRC1Q6VVB1 395 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RBM45Q8IUH3 476 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 NAXDQ8IW45 347 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 DMRT3Q9NQL9 472 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CTPS2Q9NRF8 586 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 LRIT2A6NDA9 550 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2A4O95047 310 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 MGMTP16455 207 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EDNRAP25101 427 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MELKQ14680 651 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RPE65Q16518 533 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PCGF3Q3KNV8 242 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GLT8D1Q68CQ7 371 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2A7Q96R45 310 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EGLN3Q9H6Z9 239 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 KCNK12Q9HB15 430 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GHRLQ9UBU3 117 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TRPV2Q9Y5S1 764 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CDHR4A6H8M9 788 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TBL1XO60907 577 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2F2O95006 317 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TGFB1P01137 390 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SPP1P10451 314 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MMP11P24347 488 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CCL23P55773 120 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EIF5AP63241 154 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2F1Q13607 317 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 HENMT1Q5T8I9 393 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZNF561Q8N587 486 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 UROC1Q96N76 676 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EVA1AQ9H8M9 152 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CSNK1G1Q9HCP0 422 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TINAGQ9UJW2 476 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CPSF4LA6NMK7 179 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 APBA3O96018 575 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CD34P28906 385 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ATP5C1P36542 298 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 PCBP3P57721 371 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 EEF1A2Q05639 463 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 ESPNLQ6ZVH7 1005 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 C2CD4CQ8TF44 421 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EQTNQ9NQ60 294 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 UBR2Q8IWV8 1755 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TMEM82A0PJX8 343 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GPR31O00270 319 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 FOXE1O00358 373 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 FADS1O60427 444 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GCM2O75603 506 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 IGFBP6P24592 240 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 RGS8P57771 180 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 FAM27D1Q5T7N8 215 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 DNAAF1Q8NEP3 725 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TMEM169Q96HH4 297 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR1F2PQ96R84 312 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RGCCQ9H4X1 137 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CHD5Q8TDI0 1954 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SOCS6O14544 535 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 C1QCP02747 245 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MRPL3P09001 348 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 POU4F2Q12837 409 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ILF3Q12906 894 aaKnown RBP eCLIP4.69□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF17Q5VTA0 474 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 FAM220AQ7Z4H9 259 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 POGLUT1Q8NBL1 392 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR6K3Q8NGY3 331 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TIFAQ96CG3 184 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PTGFRP43088 359 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CRYBA2P53672 197 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 BHLHA9Q7RTU4 235 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MMP21Q8N119 569 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TMEM99Q8N816 258 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 KLHDC9Q8NEP7 349 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TAS2R8Q9NYW2 309 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 NDOR1Q9UHB4 597 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms