RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CARD8Q9Y2G2 431 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 GPR52Q9Y2T5 361 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 ACTL7BQ9Y614 415 aa10.53□□□□□ -0.72
TTC28-203ENST00000442232 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.72
TTC28-203ENST00000442232 NPIPA5A0A0B4J1W7 369 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 DUXAA6NLW8 204 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NPIPA7E9PJI5 369 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 ZNF195O14628 629 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 AK1P00568 194 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 LINGO3P0C6S8 592 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NPIPA8P0DM63 369 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 UBL4AP11441 157 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 HOXB4P17483 251 aaPredicted RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 PSMA4P25789 261 aaKnown RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 ATP12AP54707 1039 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 SELENBP1Q13228 472 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 CBFBQ13951 182 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 EXOSC6Q5RKV6 272 aaKnown RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 ALKBH2Q6NS38 261 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 ZNF704Q6ZNC4 412 aaPredicted RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 Q71RC1 249 aaPredicted RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 FCRLAQ7L513 359 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NUDCD3Q8IVD9 361 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 OR5AK3PQ8NH89 298 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 PSMA8Q8TAA3 256 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 POC1BQ8TC44 478 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 RNF128Q8TEB7 428 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 ZFP90Q8TF47 636 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 PLPPR2Q96GM1 343 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 SLC35G5Q96KT7 338 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NPAS1Q99742 590 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NGBQ9NPG2 151 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 EXD2Q9NVH0 621 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.73
TTC28-203ENST00000442232 KLHL13Q9P2N7 655 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 PCDHGB4Q9UN71 923 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 DTNAQ9Y4J8 743 aa10.52□□□□□ -0.73
TTC28-203ENST00000442232 RNF103-CHMP3A0A140T963 221 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 H7C1Q1 480 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
TTC28-203ENST00000442232 ZNF264O43296 627 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 EIF4E2O60573 245 aaKnown RBP10.51□□□□□ -0.73
TTC28-203ENST00000442232 TMCC2O75069 709 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 CYP7B1O75881 506 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 PRKD3O94806 890 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 HEXAP06865 529 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 BPGMP07738 259 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 PSMB1P20618 241 aaKnown RBP10.51□□□□□ -0.73
TTC28-203ENST00000442232 TMEM176BQ3YBM2 270 aaPredicted RBP10.51□□□□□ -0.73
TTC28-203ENST00000442232 KLHL26Q53HC5 615 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 ATAD3BQ5T9A4 648 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 C3orf33Q6P1S2 294 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 EMBQ6PCB8 327 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 C16orf62Q7Z3J2 963 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 KRTAP1-3Q8IUG1 177 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 KIRREL3Q8IZU9 778 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 SLC43A2Q8N370 569 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 KRTCAP2Q8N6L1 136 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 OR5W2Q8NH69 310 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 ABHD3Q8WU67 409 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 COQ8BQ96D53 544 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 MARK4Q96L34 752 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 MRGPRX4Q96LA9 322 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 C3orf30Q96M34 536 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 ZIM3Q96PE6 472 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 OR7D2Q96RA2 312 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 SMR3AQ99954 134 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 GP6Q9HCN6 339 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 KLHL9Q9P2J3 617 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 ZDHHC2Q9UIJ5 367 aa10.51□□□□□ -0.73
TTC28-203ENST00000442232 NSD1Q96L73 2696 aaPredicted RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 STX11O75558 287 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 SNUPNO95149 360 aaKnown RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 AGR2O95994 175 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 THBDP07204 575 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 G6PDP11413 515 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 PRKCAP17252 672 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 MATN1P21941 496 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 PTH2RP49190 550 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 VSNL1P62760 191 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 HBA1P69905 142 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 HPCAP84074 193 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 EMX2Q04743 252 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 CAPRIN1Q14444 709 aaKnown RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 GPR68Q15743 365 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 PDCD2Q16342 344 aaPredicted RBP10.5□□□□□ -0.73
TTC28-203ENST00000442232 SMU1Q2TAY7 513 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 KRT71Q3SY84 523 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.5□□□□□ -0.73
TTC28-203ENST00000442232 PDZK1Q5T2W1 519 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 CBLN3Q6UW01 205 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 TUSC5Q8IXB3 177 aa10.5□□□□□ -0.73
TTC28-203ENST00000442232 VPS37AQ8NEZ2 397 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms