RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 IFNA8P32881 189 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RGS6P49758 472 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 HBA1P69905 142 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 C10orf62Q5T681 223 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM71E1Q6IPT2 247 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 C16orf62Q7Z3J2 963 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC38A9Q8NBW4 561 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR11G2Q8NGC1 345 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 FCGR1BQ92637 280 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 RNF170Q96K19 258 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR1F2PQ96R84 312 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 B3GNT4Q9C0J1 378 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 Q9N2J8 555 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 EHD3Q9NZN3 535 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 DAPK2Q9UIK4 370 aa6.83□□□□□ -1.32
CDC42BPA-208ENST00000442054 A1L4Q6 167 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRAMEF27A3QJZ7 478 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 EFCAB9A8MZ26 197 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 B8ZZF3 427 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 FOXE1O00358 373 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PCDH17O14917 1159 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 CNOT3O75175 753 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 FURINP09958 794 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ERGP11308 486 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 RRM2P31350 389 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 RFC3P40938 356 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 RFX2P48378 723 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 LIM2P55344 173 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SPIN4Q56A73 249 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ACER2Q5QJU3 275 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 CPTPQ5TA50 214 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRAMEF20Q5VT98 475 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF621Q6ZSS3 439 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ARMC8Q8IUR7 673 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF540Q8NDQ6 660 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR14A16Q8NHC5 309 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 UTP15Q8TED0 518 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 NCLNQ969V3 563 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OPALINQ96PE5 141 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 BHLHE41Q9C0J9 482 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DCSTAMPQ9H295 470 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SPNS1Q9H2V7 528 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 HHATLQ9HCP6 504 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 KRT84Q9NSB2 600 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 MKLN1Q9UL63 735 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 KLF13Q9Y2Y9 288 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 KCNMB2Q9Y691 235 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PCNX1Q96RV3 2341 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 EYSQ5T1H1 3165 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 J3KTA2 159 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 CRYBB2P43320 205 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ASMTP46597 345 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 HSD17B7P56937 341 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRR5P85299 388 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF79Q15937 498 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF404Q494X3 552 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF766Q5HY98 468 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 NDUFAF5Q5TEU4 345 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 KLHL17Q6TDP4 642 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SVOPQ8N4V2 548 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZBED6CLQ96FA7 236 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 APOL4Q9BPW4 351 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 MAPKAP1Q9BPZ7 522 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SOSTQ9BQB4 213 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ZNF649Q9BS31 505 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OR51E2Q9H255 320 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 KLHL31Q9H511 634 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PTGES2Q9H7Z7 377 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SDHAF3Q9NRP4 125 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SIDT1Q9NXL6 827 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 C5AR2Q9P296 337 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DKKL1Q9UK85 242 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 POU2F3Q9UKI9 436 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 OSGIN2Q9Y236 505 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ANKUB1A6NFN9 424 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 FAM166BA8MTA8 275 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 MASP2O00187 686 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 P2RX6O15547 441 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 TBX19O60806 448 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 CTNSO60931 367 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 HPP00738 406 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 GSTT2P0CG29 244 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 GSTT2BP0CG30 244 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 TFPIP10646 304 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 TNFRSF1BP20333 461 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 ATP5A1P25705 553 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 GDF1P27539 372 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PDX1P52945 283 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 UGT2B15P54855 530 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 DECR1Q16698 335 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLC25A30Q5SVS4 291 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 SLX4IPQ5VYV7 408 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 C12orf73Q69YU5 71 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRSS41Q7RTY9 318 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 UBQLNLQ8IYU4 475 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 PRR22Q8IZ63 422 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 METTL4Q8N3J2 472 aa6.82□□□□□ -1.32
CDC42BPA-208ENST00000442054 COX18Q8N8Q8 333 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms