RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TTYH1Q9H313 450 aaPredicted RBP18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF69Q9UC07 566 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 CLTBP09497 229 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 HTR4Q13639 388 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ARSIQ5FYB1 569 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 OR2T33Q8NG76 320 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 AHCYL2Q96HN2 611 aaKnown RBP18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SLC13A4Q9UKG4 626 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ABHD14A-ACY1A0A1B0GW23 586 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ANXA2P2A6NMY6 339 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 APOC3P02656 99 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ERVFC1P60507 584 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ERVK-21P61565 698 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 BDH1Q02338 343 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF750Q32MQ0 723 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 PRAMEF14Q5SWL7 426 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 PRAMEF13Q5VWM6 474 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 FAAP20Q6NZ36 180 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 NHLRC1Q6VVB1 395 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF620Q6ZNG0 422 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 DGLUCYQ7Z3D6 616 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 TPRA1Q86W33 373 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 CMIPQ8IY22 773 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 HAVCR2Q8TDQ0 301 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 DIO2Q92813 273 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SAV1Q9H4B6 383 aaPredicted RBP18.87■□□□□ 0.61
SHOX2-203ENST00000441443 COPS3Q9UNS2 423 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 NUMA1Q14980 2115 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 KIF26AQ9ULI4 1882 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 GRM6O15303 877 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 PI15O43692 258 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 LEFTY1O75610 366 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 MAZP56270 477 aaKnown RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 POLR2LP62875 67 aaKnown RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 TMEM44Q2T9K0 475 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 LINGO2Q7L985 606 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 TRAPPC5Q8IUR0 188 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 KAT2AQ92830 837 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 TIFAQ96CG3 184 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 PAWRQ96IZ0 340 aaKnown RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 C4orf36Q96KX1 117 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 DPYSL5Q9BPU6 564 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF416Q9BWM5 594 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 CPEB1Q9BZB8 566 aaKnown RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 ING1Q9UK53 422 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 HMGN2P05204 90 aaKnown RBP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 OR12D2P58182 307 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 ST3GAL3Q11203 375 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 GNA13Q14344 377 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 UBE2E3Q969T4 207 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 EQTNQ9NQ60 294 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 LHX9Q9NQ69 397 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHOX2-203ENST00000441443 GPR160Q9UJ42 338 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 ENTPD4Q9Y227 616 aa18.86■□□□□ 0.61
SHOX2-203ENST00000441443 MCRIP1C9JLW8 97 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ARPC5O15511 151 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 KDM4BO94953 1096 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 FGBP02675 491 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 STATHP02808 62 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ADH1AP07327 375 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 C4BPBP20851 252 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 CCR9P51686 369 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 NCBP2P52298 156 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 OC90Q02509 493 aaPredicted RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ETFDHQ16134 617 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 CLVS2Q5SYC1 327 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 METTL3Q86U44 580 aaKnown RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 SUN3Q8TAQ9 357 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 CFHR5Q9BXR6 569 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ENKD1Q9H0I2 346 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 OR51V1Q9H2C8 321 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 UBQLN3Q9H347 655 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 HRASLSQ9HDD0 168 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 NPDC1Q9NQX5 325 aaPredicted RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 PRKAG2Q9UGJ0 569 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ZMIZ1Q9ULJ6 1067 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 HS3ST2Q9Y278 367 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 CARNS1A5YM72 827 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 ERAL1O75616 437 aaKnown RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 SERPIND1P05546 499 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 PSMB1P20618 241 aaKnown RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 FPR3P25089 353 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 STAT5AP42229 794 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 MNX1P50219 401 aaPredicted RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 PSMA6P60900 246 aaKnown RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 HLXQ14774 488 aaPredicted RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 NDUFAF5Q5TEU4 345 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 OR2A12Q8NGT7 310 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 AMDHD1Q96NU7 426 aa18.85■□□□□ 0.61
SHOX2-203ENST00000441443 AK6Q9Y3D8 172 aaKnown RBP18.85■□□□□ 0.61
SHOX2-203ENST00000441443 TGM6O95932 706 aa18.84■□□□□ 0.61
SHOX2-203ENST00000441443 THY1P04216 161 aa18.84■□□□□ 0.61
SHOX2-203ENST00000441443 NDUFV2P19404 249 aa18.84■□□□□ 0.61
SHOX2-203ENST00000441443 ANXA7P20073 488 aaKnown RBP18.84■□□□□ 0.61
SHOX2-203ENST00000441443 FRKP42685 505 aaPredicted RBP18.84■□□□□ 0.61
SHOX2-203ENST00000441443 MELKQ14680 651 aa18.84■□□□□ 0.61
SHOX2-203ENST00000441443 MPP7Q5T2T1 576 aa18.84■□□□□ 0.61
SHOX2-203ENST00000441443 FCRLBQ6BAA4 426 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms