RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SPIN4Q56A73 249 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TCEAL5Q5H9L2 206 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PAGE2BQ5JRK9 111 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 C9orf152Q5JTZ5 239 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM78AQ5JUQ0 283 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 KRBOX4Q5JUW0 171 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBM48Q5RL73 367 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OTUD3Q5T2D3 398 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 C9orf64Q5T6V5 341 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CPTPQ5TA50 214 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ASPHD1Q5U4P2 390 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANXA8L1Q5VT79 327 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM46CQ5VWP2 391 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ACSM2BQ68CK6 577 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PMS2CLQ68D20 193 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RAET1GQ6H3X3 334 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HEPHL1Q6MZM0 1159 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CES5AQ6NT32 575 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MED27Q6P2C8 311 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DOK6Q6PKX4 331 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TBPL2Q6SJ96 375 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 LCTLQ6UWM7 567 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ENPP6Q6UWR7 440 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF621Q6ZSS3 439 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM26Q6ZUK4 368 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ERN2Q76MJ5 926 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRMT11Q7Z4G4 463 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPR141Q7Z602 305 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBM23Q86U06 439 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SERPINA11Q86U17 422 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANKRD46Q86W74 232 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HIPK1Q86Z02 1210 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ERI1Q8IV48 349 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZDHHC23Q8IYP9 409 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 C8orf59Q8N0T1 100 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR8H3Q8N146 312 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLEC4FQ8N1N0 589 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZCCHC7Q8N3Z6 543 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RNF175Q8N4F7 328 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 C1orf52Q8N6N3 182 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM217Q8N7C4 229 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM86B1Q8N7N1 296 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 VN1R2Q8NFZ6 395 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR7G3Q8NG95 312 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR7A2PQ8NGA2 310 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR8J2Q8NGG1 315 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR9A1PQ8NGU1 263 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 GOT1L1Q8NHS2 421 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDC26Q8NHZ8 85 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM163Q8TC26 289 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PNPT1Q8TCS8 783 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SETD7Q8WTS6 366 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM216AQ8WUB2 273 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SUSD6Q92537 303 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SMARCD2Q92925 531 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 UBE2E3Q969T4 207 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RAB7BQ96AH8 199 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMIGD2Q96BF3 282 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 NUS1Q96E22 293 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 WDR34Q96EX3 536 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SAT2Q96F10 170 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ELMOD3Q96FG2 381 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MED8Q96G25 268 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 EGLN2Q96KS0 407 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 LINC00615Q96LM1 132 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DGAT2Q96PD7 388 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DUX5Q96PT3 197 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TEFMQ96QE5 360 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR2A14Q96R47 310 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PANX1Q96RD7 426 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MTERF1Q99551 399 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBM4BQ9BQ04 359 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 WDR77Q9BQA1 342 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 EFCAB11Q9BUY7 163 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBM4Q9BWF3 364 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OSBPL10Q9BXB5 764 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ING2Q9H160 280 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR2AG1Q9H205 316 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MTIF3Q9H2K0 278 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 IKZF5Q9H5V7 419 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HPS4Q9NQG7 708 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DYRK4Q9NR20 520 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM118AQ9NWS6 357 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM120CQ9NX05 1096 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CIDEBQ9UHD4 219 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 BTNL2Q9UIR0 455 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SAMD4AQ9UPU9 718 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DHDHQ9UQ10 334 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ITM2BQ9Y287 266 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 NEUROG3Q9Y4Z2 214 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ORC6Q9Y5N6 252 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLXNA4Q9HCM2 1894 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TET1Q8NFU7 2136 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 KIAA1671Q9BY89 1806 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 hCG_1809904A0A1W2PP81 198 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 A0A1W2PPE2 198 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 GNG14A0A1W2PPG7 69 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 A0A1W2PR64 198 aa3.18□□□□□ -1.9
HMGB3P11-201ENST00000440127 KRT87PA6NCN2 255 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms