RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 FAM215AQ9Y5M1 114 aa17.62■□□□□ 0.41
SEMA3B-206ENST00000439487 A0A087WZY1 265 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 A0A0G2JPF8 293 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 WIPF3A6NGB9 483 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 HNRNPCL2B2RXH8 293 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 HNRNPCL3B7ZW38 293 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 FAM47E-STBD1D6RA91 191 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 HNRNPCL1O60812 293 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 WDR1O75083 606 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 DBIP07108 87 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 HNRNPCL4P0DMR1 293 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 ARAFP10398 606 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 COX4I1P13073 169 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 RPS4Y1P22090 263 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 LHX2P50458 406 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 CCR4P51679 360 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 SUMO3P55854 103 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 SKP2Q13309 424 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 GNA13Q14344 377 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 TOMM34Q15785 309 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 TMEM44Q2T9K0 475 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 PLPPR5Q32ZL2 321 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 C1orf185Q5T7R7 199 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 PEX5LQ8IYB4 626 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 PM20D2Q8IYS1 436 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 EID3Q8N140 333 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 TOR1AIP2Q8NFQ8 470 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 RP9Q8TA86 221 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 WDR60Q8WVS4 1066 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 PMM1Q92871 262 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 ZNF524Q96C55 264 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 LRRC58Q96CX6 371 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 RCN3Q96D15 328 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 SLC35A3Q9Y2D2 325 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 DSPPQ9NZW4 1301 aa17.61■□□□□ 0.41
SEMA3B-206ENST00000439487 AHRRA9YTQ3 701 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 C5orf58C9J3I9 102 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 H3BML4 177 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 FXYD1O00168 92 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 LINGO3P0C6S8 592 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 GABRA1P14867 456 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 CPN1P15169 458 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 IL7RP16871 459 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 CDK6Q00534 326 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 PLAURQ03405 335 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 ADRM1Q16186 407 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 MTFR2Q6P444 385 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 VRK2Q86Y07 508 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 PCYOX1LQ8NBM8 494 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 FAM71CQ8NEG0 241 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 OR52P1PQ8NH57 321 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 OR5W2Q8NH69 310 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 POC1BQ8TC44 478 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 CNOT9Q92600 299 aaKnown RBP17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 ZBTB8AQ96BR9 441 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 CCT8L2Q96SF2 557 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 ARL2BPQ9Y2Y0 163 aa17.6■□□□□ 0.41
SEMA3B-206ENST00000439487 KDM4EB2RXH2 506 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 PGM3O95394 542 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 PEPDP12955 493 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 ZNF708P17019 499 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 POU3F2P20265 443 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 CLDN18P56856 261 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 NUP107P57740 925 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 PMPCAQ10713 525 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 FOXF1Q12946 379 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 CBFBQ13951 182 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 TMEM211Q6ICI0 200 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 RPTNQ6XPR3 784 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 B3GNT6Q6ZMB0 384 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 GTPBP8Q8N3Z3 284 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 BBS10Q8TAM1 723 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 PHF10Q8WUB8 498 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 SMPDL3BQ92485 455 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 RNF145Q96MT1 663 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 TTYH2Q9BSA4 534 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 BCL2L10Q9HD36 194 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 GID8Q9NWU2 228 aa17.59■□□□□ 0.41
SEMA3B-206ENST00000439487 H0Y3Z8 333 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 LINC01387J3KSC0 135 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 NPPAP01160 153 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 HOXD4P09016 255 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 GLI4P10075 376 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 NID1P14543 1247 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF17P17021 662 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 SCARB2Q14108 478 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 QPRTQ15274 297 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 CYP51A1Q16850 503 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ACSF3Q4G176 576 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 RABL3Q5HYI8 236 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 MRPL2Q5T653 305 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 PRAMEF8Q5VWM4 474 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 PRAMEF7Q5VXH5 474 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 REEP3Q6NUK4 255 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF836Q6ZNA1 936 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 MRGPRGQ86SM5 289 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 PTOV1Q86YD1 416 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 CMIPQ8IY22 773 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms