RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 RPUSD3Q6P087 351 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF613Q6PF04 617 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ZDHHC21Q8IVQ6 265 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 SULF2Q8IWU5 870 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 WDSUB1Q8N9V3 476 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 GATSQ8NAP1 163 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ZFP62Q8NB50 900 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 OR2M3Q8NG83 312 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 OR4K17Q8NGC6 315 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 OR6T1Q8NGN1 323 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 PHF10Q8WUB8 498 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 TMEM234Q8WY98 164 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 WBP1Q96G27 269 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF300Q96RE9 604 aaPredicted RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 SEPHS2Q99611 448 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 QPCTLQ9NXS2 382 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 NDUFAF4Q9P032 175 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 B4GALT7Q9UBV7 327 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 C15orf41Q9Y2V0 281 aa11.56□□□□□ -0.56
SCLT1-202ENST00000439369 RRP15Q9Y3B9 282 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 FAM32AQ9Y421 112 aaKnown RBP11.56□□□□□ -0.56
SCLT1-202ENST00000439369 PTPRQQ9UMZ3 2332 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 LRRC3CA6NJW4 275 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 M0R3H8 397 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 OIP5O43482 229 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 ENTPD5O75356 428 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 BCAS1O75363 584 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-202ENST00000439369 OR5F1O95221 314 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 F10P00742 488 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 OR1E2P47887 323 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 DNASE1L1P49184 302 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 DSCR4P56555 118 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-202ENST00000439369 SMIM11AP58511 58 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 COPZ1P61923 177 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 VLDLRP98155 873 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 NPTX1Q15818 432 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 GLYR1Q49A26 553 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-202ENST00000439369 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 WBP2NLQ6ICG8 309 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 CBLN3Q6UW01 205 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 ASB18Q6ZVZ8 466 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 GALNTL5Q7Z4T8 443 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 CATSPER1Q8NEC5 780 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 OR4D11Q8NGI4 311 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 OR10Q1Q8NGQ4 319 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 VANGL1Q8TAA9 524 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-202ENST00000439369 GPR119Q8TDV5 335 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 SLCO4A1Q96BD0 722 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 SH3YL1Q96HL8 342 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-202ENST00000439369 PRRC1Q96M27 445 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 MCHR1Q99705 422 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 AMBRA1Q9C0C7 1298 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 DSN1Q9H410 356 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 ANKRD19PQ9H560 264 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 C12orf10Q9HB07 376 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 TMEM27Q9HBJ8 222 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 DEPPQ9NTK1 212 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 ACAD8Q9UKU7 415 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 AURKCQ9UQB9 309 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 B3GNT3Q9Y2A9 372 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 TP53TG5Q9Y2B4 290 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 V9GYQ6 96 aa11.55□□□□□ -0.56
SCLT1-202ENST00000439369 TRAPPC13A5PLN9 417 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ERVH48-1M5A8F1 160 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 CDC40O60508 579 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 DEAF1O75398 565 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 CYP7B1O75881 506 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 GLSO94925 669 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 PDGFAP04085 211 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 GKN3PP0CG01 181 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 PRG2P13727 222 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 TNFRSF1BP20333 461 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ADH6P28332 368 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 SRD5A2P31213 254 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 EIF1P41567 113 aaKnown RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 SLC1A3P43003 542 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 HTR3AP46098 478 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 MEOX1P50221 254 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ST13P50502 369 aaKnown RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 CCR4P51679 360 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF41P51814 821 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 MAP2K6P52564 334 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 RIPK1Q13546 671 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 NDUFAF6Q330K2 333 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 SLC25A53Q5H9E4 307 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 TSEN54Q7Z6J9 526 aaKnown RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 LACC1Q8IV20 430 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 OFCC1Q8IZS5 231 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 RBMXL3Q8N7X1 1067 aaKnown RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 DNAJA4Q8WW22 397 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ZBTB8AQ96BR9 441 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 C1GALT1C1Q96EU7 318 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 MRGPRX4Q96LA9 322 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 PIP5K1AQ99755 562 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 S100A14Q9HCY8 104 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms