RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LRRC17Q8N6Y2 441 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF491Q8N8L2 437 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF671Q8TAW3 534 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ITFG1Q8TB96 612 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ITLN1Q8WWA0 313 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 DNAJB3Q8WWF6 145 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SLC13A3Q8WWT9 602 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PHYHIPQ92561 330 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 HIST1H2ACQ93077 130 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CCDC47Q96A33 483 aaKnown RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ELSPBP1Q96BH3 223 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 C1orf147Q96MC9 270 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CASD1Q96PB1 797 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ACCSQ96QU6 501 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 COQ7Q99807 217 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PLA2G2FQ9BZM2 168 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 C8orf33Q9H7E9 229 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZFP14Q9HCL3 533 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NRN1Q9NPD7 142 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF446Q9NWS9 450 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ARMCX1Q9P291 453 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CLIP2Q9UDT6 1046 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 IL19Q9UHD0 177 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 DNPEPQ9ULA0 475 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SPATA2Q9UM82 520 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 UBE4BO95155 1302 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CCDC171Q6TFL3 1326 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 KIAA1671Q9BY89 1806 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CACNA1EQ15878 2313 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CFAP73A6NFT4 308 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ARHGAP42A6NI28 874 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SLC9B1P1A6NJY1 282 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 RNF212BA8MTL3 300 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SPECC1L-ADORA2AF8WAN1 911 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 K7ENP7 123 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 USP9YO00507 2555 aaPredicted RBP2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MCF2LO15068 1137 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 CCL16O15467 120 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SH3BGRLO75368 114 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ZMYM6O95789 1325 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 LGALS2P05162 132 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ALPPP05187 535 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MELTFP08582 738 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ALPPL2P10696 532 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 CYP11B1P15538 503 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 PSMC3P17980 439 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 AKT2P31751 481 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SNAP25P60880 206 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TIMM10P62072 90 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 CACNA1DQ01668 2161 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 PCK2Q16822 640 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 C15orf32Q32M92 178 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ANKRD55Q3KP44 614 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 CCDC40Q4G0X9 1142 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 EIPR1Q53HC9 387 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ACER2Q5QJU3 275 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 PPM1LQ5SGD2 360 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 FAM219BQ5XKK7 198 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 REP15Q6BDI9 236 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ABRAXAS1Q6UWZ7 409 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MFSD7Q6UXD7 560 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 APOOLQ6UXV4 268 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM26Q6ZUK4 368 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 PRSS48Q7RTY5 328 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MIER3Q7Z3K6 550 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 CEACAM19Q7Z692 300 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TAF8Q7Z7C8 310 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 YRDCQ86U90 279 aaKnown RBP2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SLC22A16Q86VW1 577 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ERICH1Q86X53 443 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 HIPK1Q86Z02 1210 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 LRRC49Q8IUZ0 686 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MLKLQ8NB16 471 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TSTD1Q8NFU3 115 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 OR6T1Q8NGN1 323 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 DLG5Q8TDM6 1919 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM37Q8WXS4 190 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 P3H4Q92791 437 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM45BQ96B21 275 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 BIRC7Q96CA5 298 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 DYNLL2Q96FJ2 89 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 RBM18Q96H35 190 aaKnown RBP2.55□□□□□ -2
HMGB3P12-201ENST00000438745 NSMCE2Q96MF7 247 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 APOOQ9BUR5 198 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 NACA2Q9H009 215 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 Q9HAA7 133 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 RGS18Q9NS28 235 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 HOMER3Q9NSC5 361 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 SPASTQ9UBP0 616 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 TRIM10Q9UDY6 481 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 KCNN3Q9UGI6 736 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 KLHDC2Q9Y2U9 406 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 MRPL11Q9Y3B7 192 aaKnown RBP2.55□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF175Q9Y473 711 aa2.55□□□□□ -2
HMGB3P12-201ENST00000438745 KLF2Q9Y5W3 355 aaPredicted RBP2.55□□□□□ -2
HMGB3P12-201ENST00000438745 HCFC1P51610 2035 aa2.54□□□□□ -2
HMGB3P12-201ENST00000438745 MYH7BA7E2Y1 1941 aa2.54□□□□□ -2
HMGB3P12-201ENST00000438745 ABCB11O95342 1321 aa2.54□□□□□ -2
HMGB3P12-201ENST00000438745 IGSF9BQ9UPX0 1349 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms