RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
CUX1-206ENST00000437600 KLBQ86Z14 1044 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SPERTQ8NA61 448 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TMEM163Q8TC26 289 aa8.78□□□□□ -1
CUX1-206ENST00000437600 ASB15Q8WXK1 588 aa8.78□□□□□ -1
CUX1-206ENST00000437600 GAL3ST3Q96A11 431 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RERGQ96A58 199 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 ZNF486Q96H40 463 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 DIRAS2Q96HU8 199 aa8.78□□□□□ -1
CUX1-206ENST00000437600 KLHL28Q9NXS3 571 aa8.78□□□□□ -1
CUX1-206ENST00000437600 LIPT1Q9Y234 373 aa8.78□□□□□ -1
CUX1-206ENST00000437600 ZNF443Q9Y2A4 671 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 DTX4Q9Y2E6 619 aa8.78□□□□□ -1
CUX1-206ENST00000437600 MUC6Q6W4X9 2439 aa8.78□□□□□ -1
CUX1-206ENST00000437600 C2orf74A8MZ97 194 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TNFRSF10AO00220 468 aa8.78□□□□□ -1
CUX1-206ENST00000437600 ZGLP1P0C6A0 271 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SAGP10523 405 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 IFI30P13284 250 aa8.78□□□□□ -1
CUX1-206ENST00000437600 CD38P28907 300 aa8.78□□□□□ -1
CUX1-206ENST00000437600 NOS3P29474 1203 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TLX1P31314 330 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 GCGRP47871 477 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RORCP51449 518 aa8.78□□□□□ -1
CUX1-206ENST00000437600 ZNF136P52737 540 aa8.78□□□□□ -1
CUX1-206ENST00000437600 GFERP55789 205 aa8.78□□□□□ -1
CUX1-206ENST00000437600 BTG2P78543 158 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SIGLEC14Q08ET2 396 aa8.78□□□□□ -1
CUX1-206ENST00000437600 WDR45BQ5MNZ6 344 aa8.78□□□□□ -1
CUX1-206ENST00000437600 C19orf48Q6RUI8 117 aa8.78□□□□□ -1
CUX1-206ENST00000437600 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RPTNQ6XPR3 784 aa8.78□□□□□ -1
CUX1-206ENST00000437600 COX18Q8N8Q8 333 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TMEM105Q8N8V8 129 aa8.78□□□□□ -1
CUX1-206ENST00000437600 C9orf43Q8TAL5 461 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 PIGXQ8TBF5 258 aa8.78□□□□□ -1
CUX1-206ENST00000437600 MAP3K3Q99759 626 aa8.78□□□□□ -1
CUX1-206ENST00000437600 BEX2Q9BXY8 128 aa8.78□□□□□ -1
CUX1-206ENST00000437600 PITHD1Q9GZP4 211 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 HOXD1Q9GZZ0 328 aa8.78□□□□□ -1
CUX1-206ENST00000437600 MTHFD2LQ9H903 347 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 SMURF1Q9HCE7 757 aa8.78□□□□□ -1
CUX1-206ENST00000437600 CFL2Q9Y281 166 aa8.78□□□□□ -1
CUX1-206ENST00000437600 PEX16Q9Y5Y5 336 aa8.78□□□□□ -1
CUX1-206ENST00000437600 FAM25EA8MYX2 175 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 UBXN7O94888 489 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 PGDP52209 483 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 FOXL2P58012 376 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 FXYD6P3P58550 94 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 COPZ1P61923 177 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 TSPAN31Q12999 210 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 ZNF79Q15937 498 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 OCLNQ16625 522 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SNAP47Q5SQN1 464 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 PRAMEF17Q5VTA0 474 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 TMEM64Q6YI46 380 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 TMPRSS11AQ6ZMR5 421 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SYT9Q86SS6 491 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 CCDC190Q86UF4 302 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 ARL14Q8N4G2 192 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SIRT6Q8N6T7 355 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 GATSQ8NAP1 163 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 OR13C2Q8NGS9 318 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SPRYD4Q8WW59 207 aaPredicted RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 CNOT9Q92600 299 aaKnown RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 FGF11Q92914 225 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 PEX11GQ96HA9 241 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 POT1Q9NUX5 634 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 PILRAQ9UKJ1 303 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 CLEC4AQ9UMR7 237 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 STUB1Q9UNE7 303 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SIRT4Q9Y6E7 314 aaPredicted RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 PRODHO43272 600 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 ASNA1O43681 348 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 APEX1P27695 318 aaKnown RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 CCR5P51681 352 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 WNT4P56705 351 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 RUNX1T1Q06455 604 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 OR1Q1Q15612 314 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 TIMM50Q3ZCQ8 353 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 DCST2Q5T1A1 773 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 ARMC6Q6NXE6 501 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 CADM2Q8N3J6 435 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 CSNK1A1LQ8N752 337 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 BAHD1Q8TBE0 780 aaPredicted RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 GNPDA2Q8TDQ7 276 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 EDAQ92838 391 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 LMF1Q96S06 567 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 NXF2Q9GZY0 626 aaKnown RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 UBQLN3Q9H347 655 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 H2AFY2Q9P0M6 372 aaPredicted RBP8.77□□□□□ -1.01
CUX1-206ENST00000437600 TBC1D24Q9ULP9 559 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 SLC22A7Q9Y694 548 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 MAU2Q9Y6X3 613 aa8.77□□□□□ -1.01
CUX1-206ENST00000437600 HEATR5AQ86XA9 2040 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 OR5K3A6NET4 321 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 E9PI62 339 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 PSMD9O00233 223 aa8.76□□□□□ -1.01
CUX1-206ENST00000437600 CASKO14936 926 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms