RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 UBL7Q96S82 380 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 NXF2Q9GZY0 626 aaKnown RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SAP130Q9H0E3 1048 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SLC22A11Q9NSA0 550 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SLC2A6Q9UGQ3 507 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM131Q92545 1883 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A10PA6NDY2 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A18PA6NE21 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A16PA6NEW6 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A20PA6NIJ5 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A8PA6NJQ4 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A7PA6NKC0 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A22PA8MWA6 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A12PA8MX19 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A5PA8MXJ8 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A23PA8MXZ1 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 IGHA1P01876 353 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A15PP0C7V4 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A13PP0C7W8 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A14PP0C7W9 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FAM90A24PP0C7X0 464 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TIMP2P16035 220 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PRKACBP22694 351 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HK3P52790 923 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PDX1P52945 283 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PNLIPRP3Q17RR3 467 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 LRIT3Q3SXY7 679 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 B3GNTL1Q67FW5 361 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 JMJD6Q6NYC1 403 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SMARCD3Q6STE5 483 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 UQCC3Q6UW78 93 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ENPP7Q6UWV6 458 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PP6455Q8WZ26 134 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 OR4K3Q96R72 315 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 LPAR4Q99677 370 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF717Q9BY31 904 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ALOXE3Q9BYJ1 711 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 IL21Q9HBE4 155 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 OSGIN1Q9UJX0 560 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 RPH3AQ9Y2J0 694 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FANCMQ8IYD8 2048 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ALPK3Q96L96 1907 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 BNIP3LO60238 219 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SNAP29O95721 258 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 CD14P08571 375 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 RAB5CP51148 216 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 CDH15P55291 814 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ATP5IP56385 69 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 MPEG1Q2M385 716 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 MIDNQ504T8 468 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 WDR74Q6RFH5 385 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF620Q6ZNG0 422 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZER1Q7Z7L7 766 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM173Q86WV6 379 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZBTB8BQ8NAP8 495 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ANGPTL6Q8NI99 470 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SLC38A5Q8WUX1 472 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM19Q96HH6 336 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 AHCYL2Q96HN2 611 aaKnown RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PRRX2Q99811 253 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM138Q9NPI0 162 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PFDN2Q9UHV9 154 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HHLA2Q9UM44 414 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PCYT1BQ9Y5K3 369 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 FABP12A6NFH5 140 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 A8MVM7 634 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 AIPO00170 330 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 APOBEC1P41238 236 aaKnown RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 RFX2P48378 723 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 P2RY14Q15391 338 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 AMZ1Q400G9 498 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 C19orf48Q6RUI8 117 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 OPN5Q6U736 354 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 Q8IYB0 196 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 Q8N402 240 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 OR5M3Q8NGP4 307 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZFAND1Q8TCF1 268 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 XAGE5Q8WWM1 108 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF486Q96H40 463 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 LRR1Q96L50 414 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HBEGFQ99075 208 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 AIFM2Q9BRQ8 373 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 SLC6A15Q9H2J7 730 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 KLHL13Q9P2N7 655 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 CHRNA9Q9UGM1 479 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HMX3A6NHT5 357 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 LMO7DNF2Z398 122 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 TPST2O60704 377 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HTR1AP08908 422 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 HOXB2P14652 356 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 UQCRC1P31930 480 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 PPICP45877 212 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 STK19P49842 368 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 GRB2P62993 217 aaKnown RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 IGLV3-21P80748 117 aaPredicted RBP3.52□□□□□ -1.85
SHPRH-205ENST00000433355 CHRNEQ04844 493 aa3.52□□□□□ -1.85
SHPRH-205ENST00000433355 KIR2DS1Q14954 304 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms