RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GCLMP48507 274 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 SRP54P61011 504 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 SSTP61278 116 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 RPP38P78345 283 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 GBE1Q04446 702 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAD51Q06609 339 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 FASTKD3Q14CZ7 662 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 HERC3Q15034 1050 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ODF4Q2M2E3 257 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 GOLGA7BQ2TAP0 167 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 Q3ZCU0 254 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 PDLIM3Q53GG5 364 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CARD16Q5EG05 197 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZRANB3Q5FWF4 1079 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 NEPROQ6NW34 567 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 TEX38Q6PEX7 206 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC25A47Q6Q0C1 308 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 LCLAT1Q6UWP7 414 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZER1Q7Z7L7 766 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 SETD3Q86TU7 594 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 STX12Q86Y82 276 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 Q8N377 158 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CCDC63Q8NA47 563 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 FBXL13Q8NEE6 735 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR13C3Q8NGS6 347 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR2L2Q8NH16 312 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 UBA3Q8TBC4 463 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CXorf40AQ8TE69 158 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 DQX1Q8TE96 717 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZNF606Q8WXB4 792 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ART4Q93070 314 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 TSACCQ96A04 125 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 HDAC11Q96DB2 347 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ZNF486Q96H40 463 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CEP19Q96LK0 163 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 C10orf90Q96M02 699 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 OLFM1Q99784 485 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 PRMT1Q99873 361 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 SOSTQ9BQB4 213 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 MMP27Q9H306 513 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 POPDC2Q9HBU9 364 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 PFDN4Q9NQP4 134 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 FBXO8Q9NRD0 319 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 MAN2C1Q9NTJ4 1040 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAB20Q9NX57 234 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ENTPD4Q9Y227 616 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CFL2Q9Y281 166 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CAB39Q9Y376 341 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR51B4Q9Y5P0 310 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 NIPBLQ6KC79 2804 aaeCLIP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 HIVEP1P15822 2718 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 TNRC6AQ8NDV7 1962 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 EPM2AB3EWF7 344 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 CACNB4O00305 520 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 O00370 1275 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 POLR1CO15160 346 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 EPHB6O15197 1021 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 DUX1O43812 170 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 DPM1O60762 260 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 POP4O95707 220 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 FYNP06241 537 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 APOA4P06727 396 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RHOCP08134 193 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PAEPP09466 180 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 THRAP10827 490 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 H2AFXP16104 143 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PRKACAP17612 351 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 LHCGRP22888 699 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 MNDAP41218 407 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 CBX5P45973 191 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 NUMBP49757 651 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RGS7P49802 495 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 SULT1E1P49888 294 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 DNA2P51530 1060 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR1D5P58170 312 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 GCNT1Q02742 428 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 HSPA14Q0VDF9 509 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 CYLC2Q14093 348 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PLEKHS1Q5SXH7 462 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 TPRG1LQ5T0D9 272 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RNASEH2BQ5TBB1 312 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 LCN1P1Q5VSP4 162 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PMF1Q6P1K2 205 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 C22orf39Q6P5X5 142 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 CNSTQ6PJW8 725 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RYBPQ8N488 228 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR6S1Q8NH40 331 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAPGEF5Q92565 580 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 PEX13Q92968 403 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 ISG20Q96AZ6 181 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 ARSGQ96EG1 525 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 ATP6V1G3Q96LB4 118 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 TSNARE1Q96NA8 513 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 RUNDC3BQ96NL0 473 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 NUDT16L1Q9BRJ7 211 aaKnown RBP3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 APOOQ9BUR5 198 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC25A23Q9BV35 468 aa3.97□□□□□ -1.77
HMGB3P5-201ENST00000428894 THAP9Q9H5L6 903 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms