RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ANKK1Q8NFD2 765 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TSTD1Q8NFU3 115 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CEP76Q8TAP6 659 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 GCDHQ92947 438 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 TSLPQ969D9 159 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ZMYND19Q96E35 227 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 KLHDC7BQ96G42 594 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 DHRS1Q96LJ7 313 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 C10orf90Q96M02 699 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TNFRSF13CQ96RJ3 184 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 LRRC61Q9BV99 259 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SPATA5L1Q9BVQ7 753 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 HINT3Q9NQE9 182 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 OR6C2Q9NZP2 312 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 FBXL21Q9UKT6 434 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 DSPPQ9NZW4 1301 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SHISA3A0PJX4 238 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SHISA7A6NL88 538 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 PAHP00439 452 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 PLGP00747 810 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 TLX1P31314 330 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 TNFSF8P32971 234 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 PSMB10P40306 273 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TNFRSF4P43489 277 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CENPAP49450 140 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 CRYZQ08257 329 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 DMWDQ09019 674 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ILKQ13418 452 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 DCST2Q5T1A1 773 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 MRM1Q6IN84 353 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 SIRT6Q8N6T7 355 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 TMEM99Q8N816 258 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 SRFBP1Q8NEF9 429 aaKnown RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 ZNF524Q96C55 264 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ACTRT3Q9BYD9 372 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 BEX1Q9HBH7 125 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 COQ3Q9NZJ6 369 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ACAD8Q9UKU7 415 aa7.76□□□□□ -1.17
CD44-208ENST00000428726 ZNF443Q9Y2A4 671 aaPredicted RBP7.76□□□□□ -1.17
CD44-208ENST00000428726 ATG2AQ2TAZ0 1938 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CACNA1HO95180 2353 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 PRR19A6NJB7 356 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 J3QLW9 94 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 ZNF19P17023 458 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 TNFRSF17Q02223 184 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 GNA13Q14344 377 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 OR1Q1Q15612 314 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SLC27A4Q6P1M0 643 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CBLN3Q6UW01 205 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 USP43Q70EL4 1123 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 KANSL1Q7Z3B3 1105 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 IZUMO1Q8IYV9 350 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 FLVCR1-AS1Q8TAF5 88 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 ZPLD1Q8TCW7 415 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SFXN5Q8TD22 340 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SPRYD4Q8WW59 207 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 ZNF486Q96H40 463 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 TMEM80Q96HE8 168 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 GABRG3Q99928 467 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SARGQ9BW04 601 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CDCA4Q9BXL8 241 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 BCL2L10Q9HD36 194 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 RANGRFQ9HD47 186 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 KLHL28Q9NXS3 571 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 H2AFY2Q9P0M6 372 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 SEC14L4Q9UDX3 406 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 PILRAQ9UKJ1 303 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 HEBP2Q9Y5Z4 205 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SIRT4Q9Y6E7 314 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 A0A1B0GTH9 108 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 A0A1W2PRG6 482 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CPED1A4D0V7 1026 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 MEN1O00255 615 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CCRL2O00421 344 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 CASKO14936 926 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 GPR37O15354 613 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 RPP14O95059 124 aaKnown RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 F13BP05160 661 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SLC2A2P11168 524 aaPredicted RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 IL9P15248 144 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 MYL12AP19105 171 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 TSFMP43897 325 aaKnown RBP7.75□□□□□ -1.17
CD44-208ENST00000428726 SLC15A1P46059 708 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 MTNR1AP48039 350 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 OR10A3P58181 314 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SQSTM1Q13501 440 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 LYPD8Q6UX82 237 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 ZNF367Q7RTV3 350 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 OOSP2Q86WS3 158 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 PEX5LQ8IYB4 626 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 SMRP1Q8NCR6 262 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 OR6K6Q8NGW6 343 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 OR8K3Q8NH51 312 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 ZNRF4Q8WWF5 429 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 MOAP1Q96BY2 351 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 MMP27Q9H306 513 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 TRPV5Q9NQA5 729 aa7.75□□□□□ -1.17
CD44-208ENST00000428726 C12orf71A8MTZ7 269 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 OIP5O43482 229 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms