RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CLDND1Q9NY35 253 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 RAB6AP20340 208 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 DRD5P21918 477 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 CORO2AQ92828 525 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 C1QTNF2Q9BXJ5 285 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 TMEM212A6NML5 194 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 MPIG6BO95866 241 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 FGF4P08620 206 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 HMGCLP35914 325 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 ABHD17BQ5VST6 288 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 SERPINA12Q8IW75 414 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 GLB1L2Q8IW92 636 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 OR4N2Q8NGD1 307 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 LMF1Q96S06 567 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 C8orf33Q9H7E9 229 aaPredicted RBP13.62□□□□□ -0.23
PTPN13-203ENST00000427191 ANKMY1Q9P2S6 941 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 IGKV6D-41A0A0C4DH26 115 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 ARPC1BO15143 372 aaKnown RBP13.62□□□□□ -0.23
PTPN13-203ENST00000427191 FAM74A1Q5RGS3 127 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 MSLNLQ96KJ4 702 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 NECTIN4Q96NY8 510 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 IL26Q9NPH9 171 aa13.62□□□□□ -0.23
PTPN13-203ENST00000427191 LDB2O43679 373 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ANGPTL7O43827 346 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 DOC2AQ14183 400 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 NKPD1Q17RQ9 610 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SLC35F3Q8IY50 421 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 KLHDC8AQ8IYD2 350 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 CEBPZOSA8MTT3 80 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 GABRA5P31644 462 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ETV3P41162 512 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 EEF1A1P68104 462 aaKnown RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SNTB1Q13884 538 aaKnown RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 TBCEQ15813 527 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 EEF1A1P5Q5VTE0 462 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 WDR88Q6ZMY6 472 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 OR14L1PQ8NHC6 308 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 MRGPRX2Q96LB1 330 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ARHGAP39Q9C0H5 1083 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 KRBA1A5PL33 1030 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 FADS1O60427 444 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ELK1P19419 428 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 DESI1Q6ICB0 168 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 CNTN4Q8IWV2 1026 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 BSCL2Q96G97 398 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 NOX3Q9HBY0 568 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ACY1Q03154 408 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 CPZQ66K79 652 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 FGGYQ96C11 551 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 EIF4EP06730 217 aaKnown RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 PPT1P50897 306 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 TEAD2Q15562 447 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ST6GALNAC5Q9BVH7 336 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 OPA3Q9H6K4 179 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 KCNK13Q9HB14 408 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 SLC7A7Q9UM01 511 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 RUNX2Q13950 521 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 ARPC5LQ9BPX5 153 aa13.61□□□□□ -0.23
PTPN13-203ENST00000427191 DCAF13Q9NV06 445 aaKnown RBP13.61□□□□□ -0.23
PTPN13-203ENST00000427191 MITFO75030 526 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 GRPRP30550 384 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 TRIM23P36406 574 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 MKXQ8IYA7 352 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 SRPK3Q9UPE1 567 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 IL3RAP26951 378 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 DCAF7P61962 342 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 SEMG2Q02383 582 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 TECPR1Q7Z6L1 1165 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 BOLLQ8N9W6 283 aaKnown RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 OR4D6Q8NGJ1 314 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 LIN7BQ9HAP6 207 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RPS10-NUDT3A0A1W2PQS6 291 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 CLDN24A6NM45 220 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 TRAPPC2LH3BP13 241 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 PPP1R3DO95685 299 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 OPRL1P41146 370 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RPS10P46783 165 aaKnown RBP13.6□□□□□ -0.23
PTPN13-203ENST00000427191 GATMP50440 423 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RGNQ15493 299 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 WNT7AO00755 349 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 PRKAR1BP31321 381 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 MAGEB1P43366 347 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 RELAQ04206 551 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 COMMD6Q7Z4G1 85 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 SYNPO2LQ9H987 977 aa13.6□□□□□ -0.23
PTPN13-203ENST00000427191 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms