RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SLC22A3O75751 556 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 NTN1O95631 604 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 GUSBP08236 651 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 SUMO3P55854 103 aaPredicted RBP16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 SKP2Q13309 424 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 HDXQ7Z353 690 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 C16orf62Q7Z3J2 963 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 BTLAQ7Z6A9 289 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 RNF130Q86XS8 419 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 GLB1L3Q8NCI6 653 aaPredicted RBP16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 OR10D3Q8NH80 312 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 ROPN1LQ96C74 230 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 ZG16BQ96DA0 208 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 SLC24A3Q9HC58 644 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 EXD2Q9NVH0 621 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 GALNT8Q9NY28 637 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 ZIM2Q9NZV7 527 aa16.01■□□□□ 0.15
SBDSP1-202ENST00000423945 TEP1Q99973 2627 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 A8MXE2 369 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 H3BNH8 94 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 GTPBP1O00178 669 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 ETV2O00321 342 aaPredicted RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 UBDO15205 165 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 ZNF264O43296 627 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 CXCL13O43927 109 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 EIF4E2O60573 245 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 DNAJA2O60884 412 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 SASH3O75995 380 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 CGAP01215 116 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 CRHP06850 196 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 UBL4AP11441 157 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 NID1P14543 1247 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 PRKCAP17252 672 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 CHI3L1P36222 383 aaPredicted RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 EIF1AXP47813 144 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 KHKP50053 298 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 MVDP53602 400 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 RPS3AP61247 264 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 MAPK11Q15759 364 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 GSTA3Q16772 222 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 COX20Q5RI15 118 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 OR2A2Q6IF42 318 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 HMGN2P46Q86SG4 172 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 FBXO27Q8NI29 283 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 LRRC8CQ8TDW0 803 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 ZBTB18Q99592 522 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 EBF4Q9BQW3 602 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 RBM24Q9BX46 236 aaKnown RBP16■□□□□ 0.15
SBDSP1-202ENST00000423945 PIGMQ9H3S5 423 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 PACSIN3Q9UKS6 424 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 WDR45Q9Y484 360 aa16■□□□□ 0.15
SBDSP1-202ENST00000423945 TNFSF11O14788 317 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 CTAG2O75638 210 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 AGR2O95994 175 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 IL6P05231 212 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 CAPN3P20807 821 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 IDH3AP50213 366 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 SIRPAP78324 504 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 SORDQ00796 357 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 CHRNEQ04844 493 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 FGFBP1Q14512 234 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 SYPL1Q16563 259 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 GTDC1Q4AE62 458 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 SLC25A53Q5H9E4 307 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 DNAJC14Q6Y2X3 702 aaPredicted RBP15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 ZNF621Q6ZSS3 439 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 LILRA2Q8N149 483 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 ANKFN1Q8N957 763 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 FAM71CQ8NEG0 241 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 OR5W2Q8NH69 310 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 OR2V1Q8NHB1 315 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 RFWD2Q8NHY2 731 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 LINC01560Q8TB33 94 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 ZFP90Q8TF47 636 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 LRRC46Q96FV0 321 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 LAT2Q9GZY6 243 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 QRSL1Q9H0R6 528 aaKnown RBP15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 POLE3Q9NRF9 147 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 GPC6Q9Y625 555 aaPredicted RBP15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 AKAP6Q13023 2319 aa15.99■□□□□ 0.15
SBDSP1-202ENST00000423945 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 MSTNO14793 375 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 H6PDO95479 791 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 NUDT14O95848 222 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 CHRM4P08173 479 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ELK4P28324 431 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ADH6P28332 368 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 PGM1P36871 562 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 PEX19P40855 299 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 EIF1P41567 113 aaKnown RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 MRPL19P49406 292 aaKnown RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 QPRTQ15274 297 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 SGCBQ16585 318 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms