RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 SYT5O00445 386 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 CDC42EP2O14613 210 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ARPC5O15511 151 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 PIP5K1CO60331 668 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HPP00738 406 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 THY1P04216 161 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 PRR23D2P0DMB1 279 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 NDUFV2P19404 249 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 MAOBP27338 520 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ACVR1BP36896 505 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HOXA1P49639 335 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 KHKP50053 298 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GK2Q14410 553 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 DECR1Q16698 335 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 DMKNQ6E0U4 476 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 SLC8B1Q6J4K2 584 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ZC3H14Q6PJT7 736 aaKnown RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 PAQR7Q86WK9 346 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 NRMQ8IXM6 262 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 OR10H4Q8NGA5 316 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 OR9A1PQ8NGU1 263 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 ZNF764Q96H86 408 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 SAMD8Q96LT4 415 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 F2RL3Q96RI0 385 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 UTP23Q9BRU9 249 aaKnown RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 UBQLN3Q9H347 655 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GLIPR2Q9H4G4 154 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 ZCCHC3Q9NUD5 404 aaKnown RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 TAS2R5Q9NYW4 299 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 KLF15Q9UIH9 416 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 BRCA2P51587 3418 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 A0A0G2JPF8 293 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 NAP1L6A6NFF2 107 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HNRNPCL3B7ZW38 293 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 SIGLEC5O15389 551 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ZNF749O43361 778 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 TMPRSS11DO60235 418 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ZGLP1P0C6A0 271 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HNRNPCL4P0DMR1 293 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GATMP50440 423 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 TAS2R43P59537 309 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 SIGLEC14Q08ET2 396 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 UBXN2BQ14CS0 331 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ZNF660Q6AZW8 331 aaPredicted RBP9.95□□□□□ -0.82
USP54-204ENST00000422491 GSG1LQ6UXU4 331 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 TMEM150AQ86TG1 271 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 CHST14Q8NCH0 376 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ZDHHC1Q8WTX9 485 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HERVK_113Q902F9 699 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 GIMAP5Q96F15 307 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 C4orf36Q96KX1 117 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 ARL6Q9H0F7 186 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 NOX3Q9HBY0 568 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 INPP5EQ9NRR6 644 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 HS3ST2Q9Y278 367 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 PCDHGA5Q9Y5G8 931 aa9.95□□□□□ -0.82
USP54-204ENST00000422491 SIGLEC6O43699 453 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 CREBL2O60519 120 aaPredicted RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 ATP1B1P05026 303 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 OR1D2P34982 312 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 MECP2P51608 486 aaKnown RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 TMEM115Q12893 351 aaPredicted RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 UBE2NLQ5JXB2 153 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 C6orf132Q5T0Z8 1188 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 PDSS1Q5T2R2 415 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 TMEM220Q6QAJ8 160 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 APOOLQ6UXV4 268 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 LINGO2Q7L985 606 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 LURAP1LQ8IV03 231 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 CMTM4Q8IZR5 234 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 OR52I2Q8NH67 350 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 LGALS14Q8TCE9 139 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 BCL7CQ8WUZ0 217 aaPredicted RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 GHSRQ92847 366 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 PNPLA2Q96AD5 504 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 ZG16BQ96DA0 208 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 LRRC46Q96FV0 321 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 AMDHD1Q96NU7 426 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 MS4A8Q9BY19 250 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 FN3KQ9H479 309 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 SLC6A20Q9NP91 592 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 OPN4Q9UHM6 478 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 PURGQ9UJV8 347 aaKnown RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 NTNG1Q9Y2I2 539 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 PRKAB1Q9Y478 270 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 A0A1W2PPK0 400 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 SNRPGP15A8MWD9 76 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 REM1O75628 298 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 KDM4BO94953 1096 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 SIX6O95475 246 aa9.94□□□□□ -0.82
USP54-204ENST00000422491 POP4O95707 220 aaKnown RBP9.94□□□□□ -0.82
USP54-204ENST00000422491 FGBP02675 491 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms