RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CCR4P51679 360 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 RPS3AP61247 264 aaKnown RBP23.78■■□□□ 1.4
CDK9-202ENST00000421939 MAPK14Q16539 360 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 AP1ARQ63HQ0 302 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 P4HA3Q7Z4N8 544 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 GDF7Q7Z4P5 450 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 FUNDC1Q8IVP5 155 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 METTL25Q8N6Q8 603 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 TOR1AIP2Q8NFQ8 470 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 OR5W2Q8NH69 310 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 RFWD2Q8NHY2 731 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 POC1BQ8TC44 478 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 GTF2H4Q92759 462 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 SFXN3Q9BWM7 321 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 PINK1Q9BXM7 581 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 NPHS2Q9NP85 383 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 DCTN4Q9UJW0 460 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 APCP25054 2843 aa23.78■■□□□ 1.4
CDK9-202ENST00000421939 UQCRHLA0A096LP55 91 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 CSTAP01040 98 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 ME2P23368 584 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 CHRNEQ04844 493 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 FOXF2Q12947 444 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 SKP2Q13309 424 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 FGFBP1Q14512 234 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 SQLEQ14534 574 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 SYPL1Q16563 259 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 SLC2A7Q6PXP3 512 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 BLOC1S3Q6QNY0 202 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 EIF3MQ7L2H7 374 aaKnown RBP23.77■■□□□ 1.4
CDK9-202ENST00000421939 GCNT2Q8N0V5 402 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 ANKFN1Q8N957 763 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 GPR119Q8TDV5 335 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 INTS12Q96CB8 462 aaKnown RBP23.77■■□□□ 1.4
CDK9-202ENST00000421939 ARSGQ96EG1 525 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 AURKBQ96GD4 344 aaPredicted RBP23.77■■□□□ 1.4
CDK9-202ENST00000421939 SIKE1Q9BRV8 207 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 TPT1P8Q9HAU6 139 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 TMEM45AQ9NWC5 275 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 CCDC167Q9P0B6 97 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 ZNF175Q9Y473 711 aa23.77■■□□□ 1.4
CDK9-202ENST00000421939 GPC6Q9Y625 555 aaPredicted RBP23.77■■□□□ 1.4
CDK9-202ENST00000421939 EIF1AYO14602 144 aaKnown RBP23.76■■□□□ 1.39
CDK9-202ENST00000421939 CHRM4P08173 479 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 ELK4P28324 431 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 AGFG1P52594 562 aaKnown RBP23.76■■□□□ 1.39
CDK9-202ENST00000421939 MVDP53602 400 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 RAC1P63000 192 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 CBFBQ13951 182 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 FBXL19-AS1Q494R0 122 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 HSP90B2PQ58FF3 399 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 LRRC74BQ6ZQY2 392 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 DMRTC2Q8IXT2 367 aaPredicted RBP23.76■■□□□ 1.39
CDK9-202ENST00000421939 ARFGAP2Q8N6H7 521 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 FIG4Q92562 907 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 SPDL1Q96EA4 605 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 ZNF845Q96IR2 970 aaPredicted RBP23.76■■□□□ 1.39
CDK9-202ENST00000421939 LAT2Q9GZY6 243 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 PAIP1Q9H074 479 aaKnown RBP23.76■■□□□ 1.39
CDK9-202ENST00000421939 SLC38A1Q9H2H9 487 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 TMEM185BQ9H7F4 350 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 SLC35A3Q9Y2D2 325 aa23.76■■□□□ 1.39
CDK9-202ENST00000421939 MED12LQ86YW9 2145 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 LRBAP50851 2863 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 EEF1E1-BLOC1S5C9J1V9 151 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 EEF1E1O43324 174 aaKnown RBP23.75■■□□□ 1.39
CDK9-202ENST00000421939 CYP7B1O75881 506 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 UBTFL6P0CB48 400 aaPredicted RBP23.75■■□□□ 1.39
CDK9-202ENST00000421939 NR2F1P10589 423 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 ETFAP13804 333 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 ADH6P28332 368 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 PON3Q15166 354 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 TOMM34Q15785 309 aaPredicted RBP23.75■■□□□ 1.39
CDK9-202ENST00000421939 HMGN2P46Q86SG4 172 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 ZNF295-AS1Q8N0V1 137 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 FAM71CQ8NEG0 241 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 LRRC46Q96FV0 321 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 QRSL1Q9H0R6 528 aaKnown RBP23.75■■□□□ 1.39
CDK9-202ENST00000421939 P2RX2Q9UBL9 471 aa23.75■■□□□ 1.39
CDK9-202ENST00000421939 A0A096LPI6 279 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 PRKCAP17252 672 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 CAPN3P20807 821 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 CRATP43155 626 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 EIF1AXP47813 144 aaKnown RBP23.74■■□□□ 1.39
CDK9-202ENST00000421939 DLX5P56178 289 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 QPRTQ15274 297 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 AGKQ53H12 422 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 OR2A2Q6IF42 318 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 FBXO27Q8NI29 283 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 FNDC9Q8TBE3 224 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 RNASE6Q93091 150 aaKnown RBP23.74■■□□□ 1.39
CDK9-202ENST00000421939 ZG16BQ96DA0 208 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 ADGRG7Q96K78 797 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 MRGPRX4Q96LA9 322 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 RABEP2Q9H5N1 569 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 TRIM33Q9UPN9 1127 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 PCDHB14Q9Y5E9 798 aa23.74■■□□□ 1.39
CDK9-202ENST00000421939 ANKHD1Q8IWZ3 2542 aaKnown RBP23.74■■□□□ 1.39
CDK9-202ENST00000421939 A0A0G2JND7 137 aa23.73■■□□□ 1.39
CDK9-202ENST00000421939 NTN1O95631 604 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms