RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 SERINC5Q86VE9 423 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 SLC47A2Q86VL8 602 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 PARGQ86W56 976 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 FNDC8Q8TC99 324 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 DNAJA4Q8WW22 397 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 CRYGNQ8WXF5 182 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 ART4Q93070 314 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 MYLPFQ96A32 169 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 UPRTQ96BW1 309 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 DNAJA3Q96EY1 480 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 C11orf24Q96F05 449 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 SH3YL1Q96HL8 342 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RPRD1AQ96P16 312 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 TGM7Q96PF1 710 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RIT2Q99578 217 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 CITED1Q99966 193 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 C11orf70Q9BRQ4 267 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RPP25Q9BUL9 199 aaKnown RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 STMN4Q9H169 189 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RHOJQ9H4E5 214 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 EHD1Q9H4M9 534 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 NEK6Q9HC98 313 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 ZFP14Q9HCL3 533 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 AMBNQ9NP70 447 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 PIPOXQ9P0Z9 390 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RCOR3Q9P2K3 495 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-207ENST00000418674 KLK13Q9UKR3 277 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 RNF6Q9Y252 685 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 PIGLQ9Y2B2 252 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 GSTK1Q9Y2Q3 226 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 MOB4Q9Y3A3 225 aa2.29□□□□□ -2.04
PTPRC-207ENST00000418674 METP08581 1390 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 TRBV7-9A0A0J9YWB2 115 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 A0A1B0GTH9 108 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 BTBD17A6NE02 478 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SNTNA6NMZ2 147 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SHISA9B4DS77 424 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 TCP11X1B4DZS4 312 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SPECC1L-ADORA2AF8WAN1 911 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ABCD4O14678 606 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 STX7O15400 261 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 PI15O43692 258 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SPOPO43791 374 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 DUX1O43812 170 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 TIMM8AO60220 97 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 DFNA5O60443 496 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 FLOT1O75955 427 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 RENP00797 406 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 HOXD4P09016 255 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 RHOXF2BP0C7M4 288 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 NCK1P16333 377 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 IGFBP5P24593 272 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 PTBP1P26599 531 aaKnown RBP eCLIP2.28□□□□□ -2.041e-6■■■■□ 23
PTPRC-207ENST00000418674 LAP3P28838 519 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 NMT1P30419 496 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 NF2P35240 595 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 MAGEA5P43359 124 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 CCT3P49368 545 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ARHGDIAP52565 204 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 AP3M2P53677 418 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 PLA2G16P53816 162 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 RPS6P62753 249 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 MS4A2Q01362 244 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SPAG1Q07617 926 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 GANABQ14697 944 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 RAB35Q15286 201 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 UBE2V2Q15819 145 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ZIC1Q15915 447 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ZNF239Q16600 458 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 GGTA1PQ4G0N0 100 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 MS4A13Q5J8X5 152 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 NHLRC3Q5JS37 347 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SPANXN2Q5MJ10 180 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 LRRC66Q68CR7 880 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 LEMD1Q68G75 181 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 TTC19Q6DKK2 380 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 REG3GQ6UW15 175 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 BZW1Q7L1Q6 419 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 PRSS48Q7RTY5 328 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 TIPARPQ7Z3E1 657 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 SH2D6Q7Z4S9 175 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ACOT1Q86TX2 421 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 PAQR7Q86WK9 346 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 IQCF2Q8IXL9 164 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 GPR137CQ8N3F9 429 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 BPIFCQ8NFQ6 507 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 OR4Q3Q8NH05 313 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 KCNG3Q8TAE7 436 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 FAM81AQ8TBF8 368 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 M1APQ8TC57 530 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 MCUR1Q96AQ8 359 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 ELMO2Q96JJ3 720 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 AMDHD1Q96NU7 426 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 CHP1Q99653 195 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 BPIFA3Q9BQP9 254 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 RHOXF2Q9BQY4 288 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 IQCGQ9H095 443 aaKnown RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 POLR3FQ9H1D9 316 aaPredicted RBP2.28□□□□□ -2.04
PTPRC-207ENST00000418674 POLE4Q9NR33 117 aa2.28□□□□□ -2.04
PTPRC-207ENST00000418674 UFSP2Q9NUQ7 469 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms