RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 WBP1Q96G27 269 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 UGT2B28Q9BY64 529 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TTTY12Q9BZ98 90 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 GORASP2Q9H8Y8 452 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TMEM27Q9HBJ8 222 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 SH2D2AQ9NP31 389 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 AGPAT4Q9NRZ5 378 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 DEPPQ9NTK1 212 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TAS2R10Q9NYW0 307 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 STOML1Q9UBI4 398 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 TESQ9UGI8 421 aaKnown RBP7.72□□□□□ -1.17
TRIM48-201ENST00000417545 AURKCQ9UQB9 309 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 POMPQ9Y244 141 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 C15orf41Q9Y2V0 281 aa7.72□□□□□ -1.17
TRIM48-201ENST00000417545 ASPMQ8IZT6 3477 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 NINQ8N4C6 2090 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 A0A087WZY1 265 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ANKUB1A6NFN9 424 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 H0YHG0 523 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 M0R3H8 397 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 SYT5O00445 386 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 FRS3O43559 492 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 TRIM3O75382 744 aaPredicted RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 GKN3PP0CG01 181 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 NQO1P15559 274 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ITGA2P17301 1181 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ATP6V1B2P21281 511 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 SRD5A2P31213 254 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 PTGDSP41222 190 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ERFP50548 548 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 DSCR4P56555 118 aaPredicted RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 TAS2R41P59536 307 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 EEF1A1P68104 462 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 SKP2Q13309 424 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 PLEKHN1Q494U1 663 aaPredicted RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 COLEC12Q5KU26 742 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 LCN8Q6JVE9 175 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 RPUSD3Q6P087 351 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 POMZP3Q6PJE2 187 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ASRGL1Q7L266 308 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 GRAMD2AQ8IUY3 354 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 FAM109AQ8N4B1 249 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 OR2M3Q8NG83 312 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 OR52E4Q8NGH9 312 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 OR10Q1Q8NGQ4 319 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 OR5W2Q8NH69 310 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 STMN2Q93045 179 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 GNRHR2Q96P88 292 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 SEPHS2Q99611 448 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 MCHR1Q99705 422 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF559Q9BR84 538 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 TRIM2Q9C040 744 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 YY1AP1Q9H869 796 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 EXOSC3Q9NQT5 275 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 DCAF13Q9NV06 445 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 RLIMQ9NVW2 624 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 DNAJB12Q9NXW2 375 aaKnown RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 SLC7A8Q9UHI5 535 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 KCNE5Q9UJ90 142 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ANAPC2Q9UJX6 822 aa7.71□□□□□ -1.17
TRIM48-201ENST00000417545 RPH3AQ9Y2J0 694 aaPredicted RBP7.71□□□□□ -1.17
TRIM48-201ENST00000417545 ANKRD11Q6UB99 2663 aaPredicted RBP7.71□□□□□ -1.18
TRIM48-201ENST00000417545 CHD8Q9HCK8 2581 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 AQP12BA6NM10 295 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 CPSF4LA6NMK7 179 aaKnown RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 NPIPA5E9PKD4 350 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 GNGT2O14610 69 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 ATXN7O15265 892 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 TPST1O60507 370 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 PRKD3O94806 890 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 LGI1O95970 557 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 FABP3P05413 133 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 TNFRSF1BP20333 461 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 MAGEA5P43359 124 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 OR1E2P47887 323 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 IDH2P48735 452 aaKnown RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 GAS1P54826 345 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 KCNC4Q03721 635 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 EPS8Q12929 822 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 FOXD4Q12950 439 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SLC10A1Q14973 349 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 QPRTQ15274 297 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 INPP5JQ15735 1006 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 DUSP7Q16829 419 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 GLIPR1L2Q4G1C9 344 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 PGM2L1Q6PCE3 622 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 CBLN3Q6UW01 205 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 VTCN1Q7Z7D3 282 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 AQP12AQ8IXF9 295 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 CLIP4Q8N3C7 705 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 TMEM251Q8N6I4 163 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 WDSUB1Q8N9V3 476 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 ZFP62Q8NB50 900 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 RNF138Q8WVD3 245 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SMPDL3BQ92485 455 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SLC35B4Q969S0 331 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 ZBTB8AQ96BR9 441 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 C1GALT1C1Q96EU7 318 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms