RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 TINAGQ9UJW2 476 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 POU2F3Q9UKI9 436 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 IKZF3Q9UKT9 509 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 PDE10AQ9Y233 779 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 EIF3LQ9Y262 564 aaKnown RBP4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 AP4S1Q9Y587 144 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 KLK4Q9Y5K2 254 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 ANKHD1Q8IWZ3 2542 aaKnown RBP4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 GTF3C1Q12789 2109 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 CCDC168Q8NDH2 2452 aa4.52□□□□□ -1.69
ATG4AP1-201ENST00000416893 MED12Q93074 2177 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SHANK1Q9Y566 2161 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TNRC6AQ8NDV7 1962 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ABCA4P78363 2273 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 C15orf38-AP3S2A0A0A6YYH1 394 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 IGKV1-8A0A0C4DH67 115 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 LOC390937A0A1W2PQ73 354 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 OR2A25A4D2G3 310 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PCP4L1A6NKN8 68 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SMIM23A6NLE4 172 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 E7EQ34 232 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 H0YJX3 145 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 H3BMH7 237 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 K7ENP7 123 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CDC7O00311 574 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SLC16A5O15375 505 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ZNF749O43361 778 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ASNA1O43681 348 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SCRG1O75711 98 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 OR7A10O76100 309 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 OR6B1O95007 311 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 WISP3O95389 354 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MT-ND3P03897 115 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SELLP14151 372 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 POU2F1P14859 743 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 LIFP15018 202 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 STMN1P16949 149 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MPGP29372 298 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CMPK1P30085 196 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SPRP35270 261 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SERPINB5P36952 375 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SLC18A1P54219 525 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PSMD4P55036 377 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TMPRSS3P57727 454 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 RAB10P61026 200 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TBPL1P62380 186 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ESRRGP62508 458 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SSBP2P81877 361 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 NAE1Q13564 534 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 KRR1Q13601 381 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ZNF846Q147U1 533 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 UAP1Q16222 522 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PPP1R3AQ16821 1122 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MMEL1Q495T6 779 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 RNASE12Q5GAN4 147 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 HES5Q5TA89 166 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 C1orf146Q5VVC0 180 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 INO80CQ6PI98 192 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SBSNQ6UWP8 590 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CLEC9AQ6UXN8 241 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 KRT74Q7RTS7 529 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ARPINQ7Z6K5 226 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CMC1Q7Z7K0 106 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PAQR7Q86WK9 346 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 UBE2J2Q8N2K1 259 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SPATA6LQ8N4H0 392 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TBC1D19Q8N5T2 526 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 C11orf44Q8N8P7 122 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SLC38A9Q8NBW4 561 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ZNF540Q8NDQ6 660 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 OR2A1Q8NGT9 310 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 VANGL1Q8TAA9 524 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CKAP2Q8WWK9 683 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 S100ZQ8WXG8 99 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 KIAA1143Q96AT1 154 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 FBXL8Q96CD0 374 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MED8Q96G25 268 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PDLIM5Q96HC4 596 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SLC45A3Q96JT2 553 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 RITA1Q96K30 269 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 C7orf34Q96L11 122 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MAGEB18Q96M61 343 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 CYTH2Q99418 400 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 DOK1Q99704 481 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 DPH7Q9BTV6 452 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 DERL2Q9GZP9 239 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 SPRTNQ9H040 489 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 ATG10Q9H0Y0 220 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 GHITMQ9H3K2 345 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 EPS8L2Q9H6S3 715 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 AKIRIN1Q9H9L7 192 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 GPN2Q9H9Y4 310 aaPredicted RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 PPCSQ9HAB8 311 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 POPDC3Q9HBV1 291 aa4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 MRPS30Q9NP92 439 aaKnown RBP4.51□□□□□ -1.69
ATG4AP1-201ENST00000416893 LHX9Q9NQ69 397 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms