RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 OPN1LWP04000 364 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 IL6P05231 212 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 EVI2BP34910 448 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 POLR2JP52435 117 aaKnown RBP11.57□□□□□ -0.56
LINC00339-202ENST00000416769 NME5P56597 212 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 KLF10Q13118 480 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 TNK1Q13470 666 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 AGKQ53H12 422 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 ATG4DQ86TL0 474 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-202ENST00000416769 FUNDC1Q8IVP5 155 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 OR7A2PQ8NGA2 310 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 OR8J2Q8NGG1 315 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF675Q8TD23 568 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 TSPEARQ8WU66 669 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 LRRC37BQ96QE4 947 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 DUSP26Q9BV47 211 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 CCDC106Q9BWC9 280 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 BHLHE41Q9C0J9 482 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-202ENST00000416769 RNF122Q9H9V4 155 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 SLC35C2Q9NQQ7 365 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 PPP4R1LQ9P1A2 415 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 PRODH2Q9UF12 536 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF780BQ9Y6R6 833 aa11.57□□□□□ -0.56
LINC00339-202ENST00000416769 MYO1GB0I1T2 1018 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 EMC8O43402 210 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 FADS1O60427 444 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 NTN1O95631 604 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 LAMP1P11279 417 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 FPR1P21462 350 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 IL12BP29460 328 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 S100A3P33764 101 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 FRKP42685 505 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-202ENST00000416769 PSG6Q00889 435 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF155Q12901 538 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-202ENST00000416769 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF385BQ569K4 471 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 ANXA8L1Q5VT79 327 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 ALKBH2Q6NS38 261 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 PPP4R4Q6NUP7 873 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 ZNF704Q6ZNC4 412 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-202ENST00000416769 C20orf204Q6ZNR8 217 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 MARCH3Q86UD3 253 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 NANOS1Q8WY41 292 aaKnown RBP11.56□□□□□ -0.56
LINC00339-202ENST00000416769 NEUROG1Q92886 237 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 SLC52A3Q9NQ40 469 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 MXRA5Q9NR99 2828 aa11.56□□□□□ -0.56
LINC00339-202ENST00000416769 PRSS51A0A1B0GVH4 220 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 CFLARO15519 480 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 SCN2BO60939 215 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 CRLF1O75462 422 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 PGRP06401 933 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 CRHP06850 196 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 PEPDP12955 493 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MPIP34949 423 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 RFX3P48380 749 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 DSCR4P56555 118 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-202ENST00000416769 PHC1P78364 1004 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MLC1Q15049 377 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MAPRE2Q15555 327 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 TSC22D1Q15714 1073 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 BCL2A1Q16548 175 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 SPANXN4Q5MJ08 99 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 FAM91A1Q658Y4 838 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 OR4F3Q6IEY1 312 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 OR2A2Q6IF42 318 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 ANKRD26P1Q6NSI1 321 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 APOOLQ6UXV4 268 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 STAC2Q6ZMT1 411 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MSANTD1Q6ZTZ1 278 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 PLEKHM3Q6ZWE6 761 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 CHMP1BQ7LBR1 199 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 GALNT10Q86SR1 603 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 GGNQ86UU5 652 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 LSRQ86X29 649 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-202ENST00000416769 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 RP9Q8TA86 221 aaKnown RBP11.55□□□□□ -0.56
LINC00339-202ENST00000416769 BBS4Q96RK4 519 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 ACSS1Q9NUB1 689 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-202ENST00000416769 ELOVL5Q9NYP7 299 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 PROCRQ9UNN8 238 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 MRPS18CQ9Y3D5 142 aaKnown RBP11.55□□□□□ -0.56
LINC00339-202ENST00000416769 CAPN7Q9Y6W3 813 aa11.55□□□□□ -0.56
LINC00339-202ENST00000416769 A0A1W2PRB8 838 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 GXYLT2A0PJZ3 443 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 RNASET2O00584 256 aaKnown RBP11.54□□□□□ -0.56
LINC00339-202ENST00000416769 PDPK1O15530 556 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 IGKV1D-16P01601 117 aa11.54□□□□□ -0.56
LINC00339-202ENST00000416769 CD8BP10966 210 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms