RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SLCO1A2P46721 670 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 HTR5AP47898 357 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 RFX5P48382 616 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 RPL14P50914 215 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DNA2P51530 1060 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 XKP51811 444 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MRPS6P82932 125 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SP3Q02447 781 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 HGFACQ04756 655 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 C2orf54Q08AI8 447 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MTF1Q14872 753 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PON3Q15166 354 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TNXAQ16473 311 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PHKG1Q16816 387 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TIGD5Q53EQ6 642 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TEX30Q5JUR7 227 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 UTF1Q5T230 341 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 FAM102AQ5T9C2 384 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DDI2Q5TDH0 399 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ABHD17BQ5VST6 288 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SDHAF4Q5VUM1 108 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DMKNQ6E0U4 476 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 OR5M10Q6IEU7 315 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 REEP3Q6NUK4 255 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 VWA1Q6PCB0 445 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 BHLHB9Q6PI77 547 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 KIRREL2Q6UWL6 708 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 METTL7BQ6UX53 244 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 LRRN1Q6UXK5 716 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ZNF621Q6ZSS3 439 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 COX15Q7KZN9 410 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 CYB5R4Q7L1T6 521 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ASRGL1Q7L266 308 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MAVSQ7Z434 540 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 WDR53Q7Z5U6 358 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ZNF761Q86XN6 746 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 CACUL1Q86Y37 369 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 LDLRAD3Q86YD5 345 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SFTPA2Q8IWL1 248 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PGAM4Q8N0Y7 254 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ZFP82Q8N141 532 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 CENPSQ8N2Z9 138 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 Q8N402 240 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SLC44A3Q8N4M1 653 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 HORMAD2Q8N7B1 307 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 NFAM1Q8NET5 270 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SDR9C7Q8NEX9 313 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ATP6V1C2Q8NEY4 427 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 B3GNT7Q8NFL0 401 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DMBX1Q8NFW5 382 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 OR2AP1Q8NGE2 309 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 OR10A7Q8NGE5 316 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 OR56A1Q8NGH5 318 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTL9Q8TC94 416 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DYNC2LI1Q8TCX1 351 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SAP25Q8TEE9 199 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 LRRC15Q8TF66 581 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 NUDCD2Q8WVJ2 157 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DNAJB3Q8WWF6 145 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 STMN2Q93045 179 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PIGTQ969N2 578 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ISOC2Q96AB3 205 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 UPRTQ96BW1 309 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 LIN37Q96GY3 246 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TMEM19Q96HH6 336 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TXNDC15Q96J42 360 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 FAM84BQ96KN1 310 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TOX2Q96NM4 488 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 TIMP4Q99727 224 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 AGPAT1Q99943 283 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MCRIP2Q9BUT9 160 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 GPR174Q9BXC1 333 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PORCNQ9H237 461 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ESRP2Q9H6T0 727 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 Q9H8V8 135 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 SEBOXQ9HB31 216 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 NMRAL1Q9HBL8 299 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 RAVER2Q9HCJ3 691 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PHPT1Q9NRX4 125 aaPredicted RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 CYSLTR2Q9NS75 346 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DDX19AQ9NUU7 478 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 PLEKHJ1Q9NW61 149 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 NPAP1Q9NZP6 1156 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 KLRF1Q9NZS2 232 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 KCNE5Q9UJ90 142 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ANAPC7Q9UJX3 599 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MYO6Q9UM54 1294 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 DIMT1Q9UNQ2 313 aaKnown RBP2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 NSG2Q9Y328 171 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ZNF337Q9Y3M9 751 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 RNF115Q9Y4L5 304 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 ETV7Q9Y603 341 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 V9GYY9 64 aa2.84□□□□□ -1.95
CTDSPL-203ENST00000416688 UMODL1Q5DID0 1318 aa2.84□□□□□ -1.96
CTDSPL-203ENST00000416688 ANKRD30BQ9BXX2 1392 aa2.84□□□□□ -1.96
CTDSPL-203ENST00000416688 ATP10AO60312 1499 aa2.84□□□□□ -1.96
CTDSPL-203ENST00000416688 TRBV9A0A0B4J1U6 114 aa2.83□□□□□ -1.96
CTDSPL-203ENST00000416688 ATP6AP2A0A1C7CYW4 349 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms