RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HACD4Q5VWC8 232 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRICKLE2Q7Z3G6 844 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 POGLUT1Q8NBL1 392 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 KAT2AQ92830 837 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 YIPF4Q9BSR8 244 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 BRF2Q9HAW0 419 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 HRASLSQ9HDD0 168 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 BIN3Q9NQY0 253 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 BABAM2Q9NXR7 383 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 SYNDIG1LA6NDD5 238 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 REM1O75628 298 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 GIPP09681 153 aaPredicted RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZDHHC11BP0C7U3 371 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 GPR4P46093 362 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 PREPP48147 710 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 CCR9P51686 369 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 PRKAG1P54619 331 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 CNTN1Q12860 1018 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 C11orf88Q6PI97 169 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 CDH26Q8IXH8 852 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5M9Q8NGP3 310 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 KLK6Q92876 244 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 QRSL1Q9H0R6 528 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 MAN2C1Q9NTJ4 1040 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 KLK11Q9UBX7 282 aa13.71□□□□□ -0.21
NCKIPSD-204ENST00000416649 GON4LQ3T8J9 2241 aa13.71□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A087WUU8 490 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 DAPL1A0PJW8 107 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 SERTM1A2A2V5 107 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 KDM4EB2RXH2 506 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CCL16O15467 120 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 FGF18O76093 207 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 RASGRP1O95267 797 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ATF1P18846 271 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CTSCP53634 463 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 EPHA4P54764 986 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 SLBPQ14493 270 aaKnown RBP eCLIP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 C1orf94Q6P1W5 598 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 RAB11FIP2Q7L804 512 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 C6orf120Q7Z4R8 191 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 LILRA3Q8N6C8 439 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM99Q8N816 258 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TINAGL1Q9GZM7 467 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 NPDC1Q9NQX5 325 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR2W5A6NFC9 320 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM202A6NGA9 273 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 J3QLW9 94 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 SSX5O60225 188 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 GALR3O60755 368 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 FABP1P07148 127 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF35P13682 527 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CBR1P16152 277 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF19P17023 458 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACHEP22303 614 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 HSD3B2P26439 372 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 PBLDP30039 288 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 STARP49675 285 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TAS2R41P59536 307 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 PLPP4Q5VZY2 271 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM150AQ86TG1 271 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACBD7Q8N6N7 88 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM185AQ8NFB2 350 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR4Q3Q8NH05 313 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 NRTNQ99748 197 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TAAR2Q9P1P5 351 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 STOX2Q9P2F5 926 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CLEC4EQ9ULY5 219 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 AK6Q9Y3D8 172 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CPSF4LA6NMK7 179 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 GFYI3L273 518 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 RTCAO00442 366 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TGM5O43548 720 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 UGDHO60701 494 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRAF2O60831 178 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 FOSL1P15407 271 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 LBX1P52954 281 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 HEPHL1Q6MZM0 1159 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 PLBD1Q6P4A8 553 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CPXM2Q8N436 756 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 C17orf47Q8NEP4 570 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR52I2Q8NH67 350 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 CXorf40BQ96DE9 158 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 TRIM36Q9NQ86 728 aa13.7□□□□□ -0.22
NCKIPSD-204ENST00000416649 ABHD14A-ACY1A0A1B0GW23 586 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 SMAD9O15198 467 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRAMEF2O60811 474 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms