RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SLC2A4P14672 509 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 NQO1P15559 274 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 BGNP21810 368 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 MGAT1P26572 445 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CD82P27701 267 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 RBMS1P29558 406 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CALCRP30988 508 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PTGFRP43088 359 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SLC6A9P48067 706 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PDLIM4P50479 330 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CCR6P51684 374 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PRELPP51888 382 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 KPNA2P52292 529 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 VAV2P52735 878 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GALCP54803 685 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 DLX5P56178 289 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TAS2R39P59534 338 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PPIAP62937 165 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 IL13RA1P78552 427 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SLC7A9P82251 487 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GTF2BQ00403 316 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 DHODHQ02127 395 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 OGDHQ02218 1023 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 FOLH1Q04609 750 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ACSM2AQ08AH3 577 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SRSF6Q13247 344 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TNK1Q13470 666 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 MTM1Q13496 603 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 RAB31Q13636 194 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GANABQ14697 944 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TNXAQ16473 311 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 POU2AF1Q16633 256 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 WDR72Q3MJ13 1102 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SOWAHCQ53LP3 525 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GCSAMLQ5JQS6 135 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SPIN3Q5JUX0 258 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 C9orf64Q5T6V5 341 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SUSD4Q5VX71 490 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 FBXW9Q5XUX1 488 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ACSM2BQ68CK6 577 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM225Q6GV28 225 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PRR5LQ6MZQ0 368 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ACSM6Q6P461 480 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 EMBQ6PCB8 327 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SPNS3Q6ZMD2 512 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 DPY19L2P2Q6ZN68 376 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMPRSS11FQ6ZWK6 438 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 MOB2Q70IA6 237 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CENPUQ71F23 418 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 OTOP2Q7RTS6 562 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 APTXQ7Z2E3 356 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GPRIN1Q7Z2K8 1008 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 DPY19L4Q7Z388 723 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 S100A7AQ86SG5 101 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ADGRE4PQ86SQ3 457 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 IGFN1Q86VF2 1251 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMPRSS6Q8IU80 811 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TGIF2LXQ8IUE1 241 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CMTM8Q8IZV2 173 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PGAM4Q8N0Y7 254 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM132CQ8N3T6 1108 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 STPG2Q8N412 459 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SVOPLQ8N434 492 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM199Q8N511 208 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZCCHC9Q8N567 271 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 C2orf73Q8N5S3 287 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CDYL2Q8N8U2 506 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 HJURPQ8NCD3 748 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 B3GNT7Q8NFL0 401 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 OR7G2Q8NG99 324 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 OR9A4Q8NGU2 314 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 OR5H6Q8NGV6 325 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PIGXQ8TBF5 258 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM163Q8TC26 289 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 Q8TCH9 128 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 FAR1Q8WVX9 515 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SOCS4Q8WXH5 440 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 C11orf40Q8WZ69 217 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM203Q969S6 136 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PTH2Q96A98 100 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 VOPP1Q96AW1 172 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ANKRD9Q96BM1 317 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PABPC5Q96DU9 382 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF503Q96F45 646 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 MARK4Q96L34 752 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 BIRC8Q96P09 236 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 LMF2Q9BU23 707 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 MAP1LC3CQ9BXW4 147 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ULBP2Q9BZM5 246 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SIK2Q9H0K1 926 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PLEKHA4Q9H4M7 779 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM38AQ9H6F2 299 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 NMNAT1Q9HAN9 279 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMBIM4Q9HC24 238 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 EML4Q9HC35 981 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CPNE5Q9HCH3 593 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM138Q9NPI0 162 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CUTCQ9NTM9 273 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms